Dickeya ananatis: V6C41_06665
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Entry
V6C41_06665 CDS
T11170
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dad Dickeya ananatis
Pathway
dad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V6C41_06665 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dad03021
]
V6C41_06665 (rho)
03019 Messenger RNA biogenesis [BR:
dad03019
]
V6C41_06665 (rho)
Transcription machinery [BR:
dad03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
V6C41_06665 (rho)
Messenger RNA biogenesis [BR:
dad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
V6C41_06665 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
XKY19506
LinkDB
All DBs
Position
complement(1488102..1489361)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLAAPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaaaaatacgccagtgtctgagttaattactcttggcgaaaat
atggggctggagaatctggctcgcatgcgtaaacaggatattattttcgctatcctcaag
cagcacgcgaaaagtggtgaagatatctttggcgatggcgtactggaaatattgcaggat
ggttttggtttcctccgctccgcagacagttcctacctcgccggccctgatgatatctac
gtttcccccagccaaatccgacgcttcaacctccgcactggtgacaccatttccggtaag
attcgtcctccgaaagagggtgaacgctatttcgcgctgttgaaggtcaatgaagtcaac
tacgacaaaccggaaaatgcccgcagcaagatcctgtttgagaacctgacaccgctgcat
gctaattcgcgcctgcgtatggagcgtggcaacggttctaccgaagacctgaccgcccgc
gtgctggacctggccgcccctatcggtcgtggacagcgtggtctgattgttgcgccgccg
aaagccggtaaaaccatgctgctgcaaaacattgcccagagcattgcttacaaccatccg
gattgcgtgctgatggtgctgctgattgacgaacgtccggaagaagtgacggaaatgcag
cgtctggtgaaaggggaagtggtggcgtcgacgttcgacgaacccgcttctcgccacgtt
caggtcgccgaaatggtgattgagaaagccaagcgtctggttgagcataagaaagacgtg
attatcctgctggactctatcacccgtctggctcgtgcctacaacaccgtagtaccggca
tccggtaaagtcctgaccggtggtgtggatgctaacgccctgcatcgtccgaagcgtttc
tttggtgcggcccgtaacgttgaagagggcggcagcctgactatcatcgccaccgcgctg
atcgataccggctcgaagatggacgaagtgatttacgaagaatttaagggcaccggtaac
atggaactgcacctgtctcgtaagattgcggagaaacgtgtgttcccggcgattgattac
aaccgctccggtacccgtaaggaagagctgttgaccacgtctgaagagctgcagaagatg
tggattctgcgcaagattatccacccgatgggggaaatcgacgcgatggagttcttgatc
aacaaactggcgatgaccaaaaccaacgacgaattcttcgatatgatgaaacggtcgtaa
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