Dickeya ananatis: V6C41_08390
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Entry
V6C41_08390 CDS
T11170
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dad Dickeya ananatis
Pathway
dad00300
Lysine biosynthesis
dad00470
D-Amino acid metabolism
dad01100
Metabolic pathways
dad01110
Biosynthesis of secondary metabolites
dad01120
Microbial metabolism in diverse environments
dad01230
Biosynthesis of amino acids
Module
dad_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dad00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V6C41_08390
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V6C41_08390
Enzymes [BR:
dad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
V6C41_08390
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
XKY19805
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All DBs
Position
1873786..1875120
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AA seq
444 aa
AA seq
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MADPAATQPDALFANGCLFADGYVEEIPVATIARHVGTPFYVYSARQLRRQLQHLYQQLP
AGTAVYYSLKANPNLSVVKTLVEQGTGCEVCSPAELDTALAAGVLPQNMLYVGPGKSLPA
LAHAMNCGIRAIVAESVTELDNINQLAAQAGTVQTVALRINPDFSSEHARLVMSGKPTQF
GMTLDTLQTVLACLSRWPSLAVRGFHVYLGTRILNAQAIADNTRNILQLTLNLRDQHQLT
LDFVDIGGGFGVPYFPKETALDLPALGDAIAPIVADFRRQAADTQIIIELGRYLVAEAGL
FVTRVNTLKTAGGKTFAICDGGANCHSAAAGLNSMLRKNFPLLRLGDNHSRPVQPYQVSG
PLCTPTDLLGDNVLLPTLAVNDLIGITHSGAYGLTASPGLFLSFGYPAEVMVDGHRLIQI
RQPETTAQLLARQQPVELWHGEES
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccctgccgccacccagcctgacgcgctgtttgctaacggctgtctgtttgcc
gacggttatgtagaagagataccggttgcgacgatcgcccggcatgtcggcacgcctttt
tacgtctacagcgcccgtcagctacgtcgccagcttcagcatctctatcagcaactgcca
gccggaacagcggtgtactattctctgaaggcgaacccgaacctgtcggtggtgaaaacg
ctggtggagcaagggacggggtgcgaggtgtgttcgcccgcggaactggataccgcgctg
gcagccggtgttttaccgcaaaatatgctgtatgtcgggccgggcaagtcgttaccggcg
ctagcgcacgccatgaattgtggtatccgggcgattgtggcggaatccgtcaccgagctg
gataacatcaaccagttggcggcacaggctggcaccgtacaaacggtggcgctacgcatc
aacccggattttagcagtgaacacgccagactggtgatgagcggaaaacctacccagttc
gggatgacgctggatacgttgcaaaccgtgctggcttgtctgtcccgttggccttccctt
gccgtgcgcggttttcatgtctatctgggaacgcgtatcctcaacgcccaggctatcgcc
gacaatacccgaaatatcctgcaactgacactaaacctgcgcgatcaacaccagctaaca
ctggattttgtcgatatcggcggtggttttggcgttccttatttccccaaagaaacagcg
ctggatttaccggcactgggtgatgctatcgcccccattgtggcggatttccgccgccag
gccgccgatacgcaaatcatcattgaactgggacgctatctggtggcggaggcgggcctg
ttcgtcacccgagtcaacaccctgaaaaccgcgggtggaaagacattcgccatttgcgat
ggcggagccaattgccacagtgcggcggcaggcttgaacagcatgctgcgtaaaaatttt
ccgctgttacggctgggtgataatcactcccggccggtgcagccttatcaggtcagcgga
ccgctttgcacccccaccgacctgctgggcgataacgtgctgttgccgacgctggcggtc
aacgacctgatcggcatcacccactccggcgcttatgggttaactgcctcacccggtttg
ttcctcagcttcggttacccagcggaagtgatggtagatggacaccggctgattcagatt
cgccagccggagaccacggcacagttactggctcgtcaacagccggttgagctctggcac
ggagaggaatcatga
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