Dickeya ananatis: V6C41_08525
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Entry
V6C41_08525 CDS
T11170
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
dad Dickeya ananatis
Pathway
dad00240
Pyrimidine metabolism
dad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dad00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
V6C41_08525
Enzymes [BR:
dad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
V6C41_08525
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
HicA_toxin
Motif
Other DBs
NCBI-ProteinID:
XKY19831
LinkDB
All DBs
Position
complement(1906186..1907136)
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AA seq
316 aa
AA seq
DB search
MSKTDFEHELLRFSDEVKDALYTGKPVVALESTVIAHGLPYPDNVATARNIEAAVRAEGA
IPATIGIENGRFLIGMSDADLERFGATKGIVKTSSRDIPVILAQNGKGATTVASSLVAAD
LAGIPFFASAGIGGVHRGAEKSMDISADLIQFTRSRVAVVCAGAKSILDLGLTLEYLETQ
CVPIISYQSDDFPAFYCRSSGFPSPHRLDDPHVVARTIEMHWKLGNRSSVLITHPIHDSD
AIDKDEVESIIREAAIQAEHEGIRGPGATPYLMRAVAKATQGRTVKANMSVLISTAALAG
RLACAHTDYLRQQNQV
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaacggattttgagcatgaattgctgcggtttagcgacgaagtaaaagatgcg
ctgtataccggtaaaccggtcgtagcgttggagtcgaccgtgattgctcacggtttgcct
taccctgacaatgtcgctaccgccagaaatattgaagcggctgttcgcgctgaaggggcg
attcccgcgacgattggcatcgaaaacggtcggtttttgattggtatgtcggatgctgac
ctcgagcgttttggggcgacgaaagggattgtgaaaaccagtagccgtgatatcccggtg
attctggctcagaacggcaaaggcgcgaccaccgtggcgtcatcgctggtggcagcagac
ctggcggggattcctttcttcgcgtcggcagggattggcggcgtgcaccgtggggcggaa
aagtcgatggatatctccgccgacttgatccaattcacccgctcccgggtggcggtggtc
tgtgctggtgccaagagtattctcgatctgggtctgacgctcgaatatctggaaacccag
tgcgtacctatcatttcctatcaatctgacgatttccccgcgttttactgccgctccagc
ggctttcccagccctcaccggttggacgatccgcacgttgttgcccgcaccattgaaatg
cactggaagctgggtaaccgcagttcggtgctgattacccaccccattcatgacagcgac
gccattgataaggacgaagtcgagtcgattatccgtgaggcggcgattcaggcagaacat
gaaggtattcgcgggccgggtgccacgccgtatctgatgcgtgccgtcgccaaagcgaca
caaggacggacagtgaaagcgaacatgtcggtgttgatcagtactgcggcgctggcgggc
cgtctggcctgtgctcataccgactacctgcggcagcaaaatcaggtataa
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