Dickeya ananatis: V6C41_11325
Help
Entry
V6C41_11325 CDS
T11170
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dad Dickeya ananatis
Pathway
dad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V6C41_11325 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dad03019
]
V6C41_11325 (pnp)
03016 Transfer RNA biogenesis [BR:
dad03016
]
V6C41_11325 (pnp)
Enzymes [BR:
dad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
V6C41_11325 (pnp)
Messenger RNA biogenesis [BR:
dad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
V6C41_11325 (pnp)
Transfer RNA biogenesis [BR:
dad03016
]
Prokaryotic type
tRNA degradation factors
V6C41_11325 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_2
OB_RRP5_4th
aRib
S1_RRP5
KH-I_KHDC4-BBP
DUF4172
Spt6_S1
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
XKY16561
LinkDB
All DBs
Position
2508078..2510198
Genome browser
AA seq
706 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKHAKPGQDFFPLT
VNYQERTYAAGRIPGGFFRREGRPSEGETLISRLIDRPIRPLFPDGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTTEELKTSRLDLVVA
GTEGAVLMVESEADLLSEDQMLGAVVFGHDQQQVVIENIKALTAEAGKPKWNWQAPEVNV
ELHNRVQALSEARLGDAYRITEKQERYAQVDTIKADVVAALLAEDETLDENELRDILGSI
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQSIDELTGERTDRFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKPEA
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSREGVTALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAST
DGEKAKHAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATAQPQETTPVSEAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctaaatccgatcgttcgtaaattccagtacggtcaacataccgtcacgctggaaact
ggcatgatggcccgtcaggccactgccgctgttatggttagcatggatgacaccgcagta
tttgtaactgttgtgggtgccaaacacgctaaaccgggccaggatttcttcccgctgact
gttaactatcaagagcgtacctacgctgctggtcgtatccccggtggtttcttccgccgt
gaaggccgtccgagcgaaggcgaaacgctgatttcccgtttgattgaccgtccgattcgc
ccgctgttcccggatggtttcgttaacgaagtccaggttatcgctactgtagtttccgtg
aatccgcaggttaacccggatatcgttgccatgatcggtgcctctgcggcactgagtctg
tcgggtatcccgttcaatggcccgattggtgccgctcgcgttggttacatcaacgatcag
tacgtgctgaacccgacgaccgaagagctgaaaaccagccgtttggatctggtcgttgca
ggtactgaaggcgcggtactgatggtggaatccgaagcagacctgctgagcgaagatcag
atgctaggtgcagtggtattcggtcatgatcagcaacaggttgttatcgagaacatcaag
gcattgacggcagaagcgggtaaaccgaagtggaactggcaggcaccggaagtgaacgtc
gaactgcacaaccgtgtgcaggcgctgtctgaagctcgtctgggcgacgcttatcgcatc
actgaaaaacaggaacgctacgcgcaggttgataccatcaaagctgacgtggttgcagct
ctgctggcagaagatgaaacgctggacgaaaacgaactgcgtgacatcctcggcagcatc
gagaaaaacgtagtacgtagccgtgtgctgcgtggcgaaccgcgtatcgacggtcgcgaa
aaagacatgatccgtggtctggatgtacgtactggcgtgctgccgcgtactcacggttct
gcgctgttcacccgtggtgaaactcaggcgttggttaccgcgacgctgggtaccgagcgt
gatgctcagagcattgatgagctgactggcgagcgtaccgatcgcttcttgctgcactac
aacttccctccgtactccgtaggtgagaccggtatggttgggtcaccgaagcgccgcgaa
atcggtcacggtcgtctggctaaacgtggtgtactggctgttatgccgaaaccggaagcc
ttcccgtacaccgtacgtgttgtgtctgaaattaccgaatccaacggttcttcctccatg
gcttccgtctgtggtgcttcgctggcgctgatggatgcaggcgtgccgatcaaagcggct
gtagccggtatcgcgatgggtctggtgaaggaaggcgacaactacgttgtcctgtctgat
attctgggtgacgaagaccacctgggcgatatggacttcaaagtagccggtagccgtgaa
ggtgtgaccgcgttgcagatggacatcaaaatcgaagggatcacccgcgaaattatgcag
gtggctctgaatcaggccaagggtgcgcgtctgcacattctgggtgtgatggaacaggct
atcagtacgcctcgtggcgatatctccgaattcgcaccgcgtatccacaccatcaagatc
agcactgacaagatcaaagatgtgatcggtaaaggcggttctgttatccgcgcgctgact
gaagaaaccggtacgactatcgagatcgaagatgatggtacggtgaagatcgcctcgacc
gacggcgaaaaagctaaacacgcgattcgtcgtatcgaagagatcacggctgaaatcgaa
gtgggccgcatctatcagggcaaagtgactcgtatcgttgactttggcgcgtttgttgcc
atcggtggcggtaaagaaggtctggttcatatttctcagatcgccgacaagcgtgttgag
aaagtgaccgactatctgcagatgggccaggaagtaccggttaaggtactggaagtggac
cgtcagggtcgtatccgtttgagcataaaagaagcaactgctcaacctcaggaaaccaca
ccggtttctgaggcagaataa
DBGET
integrated database retrieval system
