Dickeya ananatis: V6C41_16135
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Entry
V6C41_16135 CDS
T11170
Name
(GenBank) substrate-binding domain-containing protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
dad Dickeya ananatis
Brite
KEGG Orthology (KO) [BR:
dad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dad03000
]
V6C41_16135
Transcription factors [BR:
dad03000
]
Prokaryotic type
Helix-turn-helix
LacI family
V6C41_16135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
HTH_38
Peripla_BP_4
HTH_8
HTH_23
HTH_24
HTH_3
Sigma70_r4_2
Crp
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_36
HTH_29
HTH_Crp_2
HTH_IclR
HTH_50
Sigma70_r4
HTH_7
DeoRC
Sigma54_DBD
Motif
Other DBs
NCBI-ProteinID:
XKY17420
LinkDB
All DBs
Position
3643776..3644798
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AA seq
340 aa
AA seq
DB search
MSLKQIAKTLGLSVTTVSRALNGYDDVAAQTRLRVEEEARRLGYRPNTFARRLKMGRIDA
VGLVFPMQPAPLSNTTFMEMVAEISHELAKQEIDLLLIADKEQADHHAFLRMIESRRVDA
LIVAHTLQQDPRLQYLQSVGFPFLALGRSDLPLPYAWFDFDSQAGAALATRHLISLGHRQ
IAFLGEHHPQSFIAQRRAGYLEALAAAGIAPRDALLRQVAPSRREGYQATLQWLALPQPP
TAIVIDGSTQGEGAALALRDSGRLQGERAVSLIVYDGLPADSLLEIPVTAITQATRSQVG
QQIAHMVSRLLTGEDPSSLQVLWQPQLRAGQTDNPPPATK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgaaacagattgcaaaaacgttgggattatcggtcaccaccgttagccgcgcg
ctcaatggctatgatgacgtggcggctcaaacgcgcctgcgggtggaagaagaagctcgg
cgcttaggctatcgccccaatacgtttgcccgccgactgaaaatggggcgtattgacgcc
gtggggctggtgtttcctatgcagcccgcaccgctcagtaacaccacttttatggagatg
gtggcggaaatcagccacgagctggcgaagcaggagattgatctgctgttgattgccgac
aaggagcaggccgatcaccatgcgtttttacgcatgatagaaagccgccgggtggatgcg
ttgatcgtcgcgcatacgttgcaacaagacccccgactgcaatacctgcaatcggttggc
tttccgtttttggcgctcgggcgcagtgatctgccattaccctatgcctggtttgatttt
gacagtcaggccggtgcggcgctcgccacccggcatttgatctcgcttggtcaccgtcaa
atcgcttttcttggcgaacatcatccgcaatcctttatcgcccaacgccgtgctggctat
ctggaggcattggcggcagccggtatcgccccgcgtgatgcgctgttgcgacaggtggca
ccatcacgccgggaggggtatcaggcaacgttgcaatggctggcgttgccgcagccacct
actgctatcgttatcgatggcagcacgcaaggggaaggggcagcgctggcattgcgcgac
agcggccgtctgcaaggggagcgtgcggtatcgttgatagtctatgatggcctgccagcc
gactcgttgctggaaataccggtcaccgccatcacgcaggcgacccgttcgcaggtgggc
cagcagatagcccatatggtgtcgcgtttgttgacgggggaagacccctcctcactgcag
gtgttatggcaaccgcaattgcgcgccggacagacggataacccgccgccagcaacaaaa
taa
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