Dickeya ananatis: V6C41_16600
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Entry
V6C41_16600 CDS
T11170
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
dad Dickeya ananatis
Pathway
dad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V6C41_16600 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dad03400
]
V6C41_16600 (uvrB)
DNA repair and recombination proteins [BR:
dad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V6C41_16600 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
V6C41_16600 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
UB2H
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
XKY17502
LinkDB
All DBs
Position
3738131..3740149
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AA seq
672 aa
AA seq
DB search
MSKAFKLHSAFKPAGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQ
YSRNDQAFSRGTFRVRGEVIDIFPAESDEIALRVELFDEEVERLSLFDPLTGHIVQTVPR
YTIYPKTHYVTPRERILQAMEEIKVELAERRQVLLANNKLLEEQRLAQRTTFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQLGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGGEIIDQVVRPTGLLD
PVLEVRPVTTQVDDLLSEIRKRSAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYADRITPSMERAINETQRRREKQQAYNEQNGIVPQGLNKKIGDILQIG
QPVNGKGKGKGRGKKAAEPAARYQQLSPKALDQKIRELESQMLTHAQNLEFEEAARLRDE
IHALREQFIAAS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcgttcaaactgcattctgcctttaagcccgcaggcgaccaacctgaagcg
atacgtcgtctgaaagaggggctggaagacgggctggcgcatcagacattgttgggggta
acaggctccggcaagacgtttaccattgctaacgtgattgcggatctcaaccggcctacc
atggtgctggcgccgaataaaaccctggccgcgcagttgtatggcgagatgaaggagttt
tttccggacaacgcggtggagtatttcgtgtcttactacgattactatcagcctgaagcc
tatgtgccaagctccgatacctttatcgagaaggatgcctcggttaacgaacatatcgag
cagatgcggttgtctgccaccaaggccctgctggagcggcgtgacgtggtggtggtggcg
tcggtatccgccatttatggtctgggcgacccggacctctacctgaagatgatgttgcac
ctgacacaaggtatgctgattgatcagcgcgctatcttgcgtcggctggcagaattacag
tattcccgtaacgatcaggcctttagccgtggcaccttccgggttcgcggtgaggtcatc
gatatttttccggcggaatccgatgagatagcgctgcgtgtagagttgtttgacgaagaa
gtggagcggctgtcgctgtttgacccgctcaccggccacatcgtgcaaaccgtaccgcgt
tacaccatttacccgaaaacccactatgtgacgccacgcgaacgtattttgcaggcgatg
gaagagatcaaagtcgaactggcggagcgccgtcaggtgttgctggccaacaataaactg
ttggaagagcagcggctggcgcagcgcaccaccttcgatctggaaatgatgaatgagctg
gggtattgctccggcattgaaaactactcccgctttttgtccggacgcggccccggtgaa
ccgccgccaaccttgtttgattacctgcctgccgatgggctgctggtgattgacgaatcc
cacgtgactatcccgcaactgggcgggatgtatcgtggtgaccgggcacggaaagaaacg
ctggtggaatacgggtttcgcttaccctcggcgttggataaccggccgatgaagtttgag
gagttcgaagcgctggcaccgcagaccatttatgtttcggcgacgccgggtaattacgaa
ctggaaaaatctggcggcgagataatcgatcaggtggtgcggccgaccggcctgctcgat
ccggtgctggaggtgcgcccggttacgacgcaggtggatgatttgctgtcggaaatccgc
aagcgttcggccattaacgagcgtgtactggtcactaccctgaccaaacgtatggcggaa
gacctgaccgagtatctggaagagcacggcgagcgggtacgttatctgcactcggatatc
gataccgtggagcgggtagaaatcatccgtgatttgcgactgggcgagttcgacgtgttg
gtgggtatcaacctgctgcgtgaagggctggatatgccggaagtgtcgctggtggcgatt
ctggacgccgacaaagaaggcttcctgcgctcggagcgatcgctgattcagactattggt
cgtgcggcgcgtaaccttaacggcaaggcgattttgtacgccgacaggattacgccgtcg
atggaacgcgccatcaatgaaacccaacgccgccgtgagaaacagcaggcctacaacgag
cagaatggcattgtgccgcaggggctgaacaagaagattggcgacattttgcagattggt
cagcctgtcaacggcaagggcaagggcaaaggccgcggcaagaaagcggcggaaccggcg
gcacggtatcagcaactgtcgccgaaagcgttggatcagaaaatccgtgagctggaaagc
cagatgctgacccatgcacagaatctggagttcgaagaagccgcccgtctgcgcgacgaa
atccatgcgctgcgtgagcagtttattgcggcatcctga
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