Dickeya ananatis: V6C41_16705
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Entry
V6C41_16705 CDS
T11170
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dad Dickeya ananatis
Pathway
dad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V6C41_16705 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dad03019
]
V6C41_16705 (rhlE)
Enzymes [BR:
dad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
V6C41_16705 (rhlE)
Messenger RNA biogenesis [BR:
dad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
V6C41_16705 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
AAA_22
P-loop_SecA
UvrD-helicase
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
XKY17520
LinkDB
All DBs
Position
3760814..3762184
Genome browser
AA seq
456 aa
AA seq
DB search
MSFQSLGLSADILRAVEEQGYREPTPVQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL
QLLNERPVLAKGRRPVRALILTPTRELAAQIGENVQAYSKYLRLRSLVVFGGVSINPQMM
KLRGGVDILIATPGRLLDLEHQNAVDLSQVEILVLDEADRMLDMGFIHDIRRVLAKLPPK
RQNLLFSATFSDEIKELAGKLLTNPASVEVVRRNTPSELVTQHVHFVDKKRKRELLSHLI
GKHNWQQVLVFTRTKHGANHLAELLNKDGITAAAIHGNKSQGARTRALANFKDGDIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAASTGEALSLVCVDEHKLLRDI
ERLLKREIPRIAIPGYEPDPTIKAEPIQNGRQGGRGGRGGAPRQGDRPQGERASARPQGD
RPLQPRRDGGARPAGRPEGQPAARRRPPRNKPANAQ
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcaatccctcggtctgagtgccgatattttgcgtgctgtggaagaacagggc
taccgtgagccgacgccggttcagcgtcaggcgattccggtcgtgctggaagggcgcgat
ctgatggccagcgcccagaccggcaccggcaaaaccgccggttttaccctgccgctactg
caactgctgaacgaacgcccggtactcgcgaaaggccgtcgcccggtgcgggcgttgatc
ctgacgccaacccgtgagctggcggcacagatcggcgaaaacgttcaggcgtacagcaaa
tatctgcgcttgcgctcgctggtggtattcggcggcgtcagcattaatccgcagatgatg
aagttgcgtggtggcgtcgatattctgattgctaccccaggtcgtctgttggatttggag
catcagaacgcggttgacctgtcgcaggtagagattctggtactggatgaagccgaccgt
atgctggatatgggctttatccatgatattcgccgggtgctggcgaagttaccaccaaaa
cggcagaatctgctgttttcggccaccttttccgacgagattaaagagctggctggcaag
ctgcttaccaatccggcctcggtggaagtggtgcgccgcaataccccgtccgagctggtg
acgcaacacgtgcattttgttgataagaaacgcaaacgtgagctgttgtcgcacctgatc
ggcaagcacaactggcagcaggtgctggtgtttacccgtaccaagcacggtgctaaccat
ctggcggaactgctgaataaagacggcatcaccgctgccgctatccacggcaacaagagt
cagggcgcgcgtacccgtgcactggcgaatttcaaagacggcgacatccgtgtgttggtg
gcgaccgatatcgccgcgcgtgggctggatatcgatcagttgccgcacgtggtgaactac
gaactgccgaatgtaccggaagattacgtacaccgcattggccgtaccgggcgagcagca
tcgactggtgaagcgttgtcgctggtgtgcgtggatgagcacaagctgctgcgcgatatc
gaacgtctgctgaagcgggagatcccgcgcatcgccatcccgggttacgagccggaccca
accatcaaggccgagccgatccaaaacggccgtcagggtggacgcggtggccggggcggc
gcaccacgtcagggggatcgcccacaaggtgaaagagcctctgcgcgtccacaaggcgac
cgcccacttcagccacgtcgtgacggcggcgctcgcccggcaggccgtccagaagggcaa
cctgctgctcgccgtcgcccgccgcgtaataagcctgctaacgcgcaataa
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