Dickeya ananatis: V6C41_18410
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Entry
V6C41_18410 CDS
T11170
Name
(GenBank) polysaccharide lyase family protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
dad Dickeya ananatis
Brite
KEGG Orthology (KO) [BR:
dad00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
V6C41_18410
Enzymes [BR:
dad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
V6C41_18410
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GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
SdrD_B
CarbopepD_reg_2
Ig-like_KY
NOMO1-like_2nd
NOMO_3rd
SpaA
DUF1455
Motif
Other DBs
NCBI-ProteinID:
XKY17829
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Position
4134573..4136285
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AA seq
570 aa
AA seq
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MQSRKMLIAISILGSSLAQAASPSDVSVGLSGMKAQIDNGLVSVAIGSDGSIGTLSNGSQ
NLIDKANSQVNALGKSSTGYLDYYSGAFLKFKPQQISVIENTKDIVHIAYVDNETSALSL
EYHFIVRRGVSGIYSYAVARNDTSSNLTVSELRGVYRFNPFLLDHISNGIHTTKPYLYSQ
LNNFEKIQDETWKLPDGSYYSKYDFAGYMRKTPVWGVYGNNIGAWIVPGSTEYMSGDDTK
QDLMVHQDGLAIMYMTGSHFGTPDLIAPPGWQKLYGPWLLYVNAGTDAQMYSDALARSRQ
EIASWPYNWVNDSRFSVDRASVTGSVNTTVPLNVTLSSSLNEASDVQTLGYAFTTNTDSQ
GNFRFDKVRKGKYTLTIYANGGSRPGVLYSDVVNVTGNTPIPAIQLAQAAPVVWAIGQSD
RLASEFRFGDQLRNYHWQNDVPANLTYTIGESSPAQDWYYAQTNPGSWNVNYIDRADGSG
RVLNVAFAAASNRGMTNPTTPSLSVLVNGTKVKDIQYDNDKSVYRGALNSGKYHYERIPI
DSGLLRDGTNTITFTLNGGTFMYDVVTLTK
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcagaaaaatgcttatcgcaatcagtatactgggttcctcactggcgcaggcg
gcatcaccgtctgatgtcagtgtggggctttccggcatgaaagcacaaatagataacgga
ttggtttccgtcgcgattggcagcgatggcagtatcggcacactgtcaaacggtagccaa
aatcttatcgataaagcgaatagccaggttaacgcgttgggtaaaagcagtaccggttat
ctggattattattcaggtgcatttctgaagtttaaaccacagcagatttctgtgattgaa
aacacgaaagacattgtacatattgcttatgtcgataatgaaaccagcgcgttgagtctg
gaataccactttatcgtacggcgtggtgtcagcgggatttatagctatgccgtggcacgg
aatgatacgtcatccaatctcacggtgagtgaattacgcggggtgtaccggtttaatcct
tttctgctggatcatatctccaatggtattcataccaccaaaccctacctctactcccag
ctcaataactttgagaagattcaggatgaaacctggaaattaccagatggtagttattac
tccaaatacgacttcgccggttatatgcgcaaaaccccggtctggggcgtatacggcaac
aatattggtgcatggatagtcccgggcagtactgaatatatgtcgggtgacgacaccaag
caggatttgatggtgcatcaggacgggctggcgatcatgtatatgacgggttcgcatttc
ggtacgccggacttgatagccccgcctggctggcaaaagctgtatggcccctggttgttg
tatgtgaacgccggtaccgatgcgcagatgtacagtgacgcgctggcgcgtagtcggcag
gagatcgcttcatggccatataattgggtgaacgacagtcgtttctcggtggatcgcgcc
agcgtaaccggtagcgtgaataccaccgtcccgttgaacgtgacgctatcgtcttcgctt
aatgaagcgtcagatgtacagaccttaggctatgccttcactactaataccgacagtcag
ggaaattttcgcttcgataaggtgcgcaaagggaaatataccctgacgatttacgccaat
ggtggcagcaggccgggcgtgctctacagcgatgttgtgaatgtcaccggtaacacgccg
atacccgctatccagttagctcaagcggcaccggtggtgtgggctattggccagagtgat
cggctggcgtcggaattccggtttggcgaccaactgcgcaattatcactggcagaatgat
gttccggccaatctgacttataccatcggcgagtcgagtccggcacaggattggtattac
gcccagaccaatcccggtagctggaatgtgaattatatcgatcgtgccgatggcagtggt
cgggtactgaatgtggcatttgccgcggccagtaatcggggaatgactaacccgacgacg
ccgtcgctgtcggtattggtcaacggcactaaagtcaaagacattcagtatgacaacgat
aaatccgtgtaccgaggggcgcttaatagcggtaagtatcactacgagcgtattcctatc
gacagtggtttactgcgcgacggtaccaacaccattacgtttacactcaatggtggcacc
tttatgtacgacgttgtgacattgacaaaatag
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