Desulfofarcimen acetoxidans: Dtox_0059
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Entry
Dtox_0059 CDS
T00986
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dae
Desulfofarcimen acetoxidans
Pathway
dae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dtox_0059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dae03021
]
Dtox_0059
03019 Messenger RNA biogenesis [BR:
dae03019
]
Dtox_0059
Transcription machinery [BR:
dae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Dtox_0059
Messenger RNA biogenesis [BR:
dae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Dtox_0059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
NACHT
AAA_22
AAA_25
AAA
Mor
Motif
Other DBs
NCBI-ProteinID:
ACV61022
UniProt:
C8VVF6
LinkDB
All DBs
Position
64192..65502
Genome browser
AA seq
436 aa
AA seq
DB search
MNQSDLEAKTMVELYKIAKELEIVGYSKLRKKELIFEIIKIKTEKTGLLFASGVLEILPD
GYGFLRPFKYHPSYDDIYVSASQIRRFDLRTGDRVGGQVRKPKDNERYFALLRVEQVNGI
DPQVAAERIHFDGLTPLYPQERITLETSSERKSTRIIDLIAPLGKGQRGLIVAPPKAGKT
ILLKSIANSITTNHPEIVLIILLIDERPEEVTDIERSVNAEVVSSTFDEPPENHVKVADM
VLERAKRLVEHKKDVVILMDSITRLARAHNLIVPPSGRTLSGGVDPAALHKPKRFFGAAR
KLEEGGSLTILATALVETGSRMDDVIFEEFKGTGNMELVLDRRLAEKRIFPAIDVQRSGT
RKEELLLTKDELELTWFFRKNIHGLNPWDAMEMMMEKIRGTQNNAELLQNFKQSRKATPG
RLNNPEIPTNNTRKIL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccagtctgatttagaagctaaaacaatggttgagctgtataaaatagccaaggaa
ttggaaatagtcggttactcaaagcttcgcaagaaagaattaatatttgaaattattaaa
attaagacggaaaaaaccggattgttgtttgcttccggcgtgttggaaattttacctgac
ggttatggttttttaagaccgtttaaatatcatccaagttatgatgatatctatgtatcc
gcctctcagatcaggcgttttgatctgcgaacgggtgaccgcgtaggcggccaggtaaga
aagcctaaagataatgaaaggtattttgcgttattgagggtagaacaggttaacgggatt
gatccccaggttgctgctgaaagaattcattttgacggtttaacccccctatatccccaa
gaacgaattactctggaaacttcttcggaacgaaaatctacacgaataattgatctaata
gctcccttgggtaaaggtcaacgcggcctgattgtagctcctcctaaagcaggtaaaact
attctgctgaaaagtatagctaatagcataaccaccaaccatcccgagatcgttctcata
atcttgcttattgatgaacgaccggaggaagttacggatatagaaagatctgttaatgcg
gaagtcgtcagctctacttttgatgagcctccggaaaatcatgtaaaagtggctgatatg
gttttagagcgggctaaacgcttggttgagcataaaaaagatgtggtaattttgatggac
agtattactcgcctggcccgtgctcataacttgattgtgcctcctagcggcagaaccctt
tcagggggtgttgatccggcagctttgcataaacctaaaaggttttttggtgcagcaaga
aagctggaggagggtggcagcctgactattctggctactgcattggtggaaacaggaagt
agaatggacgatgttatctttgaagagtttaaaggaaccggcaatatggagctggtatta
gatcgccgattggctgagaagagaattttccctgccatagatgttcaacgttccggaacc
agaaaagaagaacttttgttgacaaaagatgaactagagttaacgtggttcttccgcaag
aatattcacgggttgaatccctgggacgcgatggaaatgatgatggaaaaaataagaggc
acccagaacaatgcggagttgttgcaaaacttcaagcagtccaggaaagccacccccggc
cgattaaataaccccgaaatccccaccaataataccagaaagatattataa
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