Desulfofarcimen acetoxidans: Dtox_1223
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Entry
Dtox_1223 CDS
T00986
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dae
Desulfofarcimen acetoxidans
Brite
KEGG Orthology (KO) [BR:
dae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dae03032
]
Dtox_1223
03400 DNA repair and recombination proteins [BR:
dae03400
]
Dtox_1223
Enzymes [BR:
dae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Dtox_1223
DNA replication proteins [BR:
dae03032
]
Prokaryotic type
DNA Topoisomerases
Dtox_1223
DNA repair and recombination proteins [BR:
dae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Dtox_1223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Crinivirus_P26
Zn_ribbon_GRF
SAM_Exu
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ACV62107
UniProt:
C8W5C5
LinkDB
All DBs
Position
1240668..1242761
Genome browser
AA seq
697 aa
AA seq
DB search
MSTTLVIVESPAKAKSIGKFLGKKYTVKASMGHVRDLPKSQFGVDVEAGFMPKYITIRGK
GDTIKELRSAVKKADTVLLASDPDREGEAIAWHLQKLLKIEDNQPCRIEFNEITKQAIQN
AVTHPRKIDYNRVNAQQARRILDRLVGYNLSPLLWRKVRKGLSAGRVQSVAVRLICEREE
EIDSFEQVEYWTLTGKFLKAKAGFEGKLLKYRGEKLEVSDEESMQKILQALEGSSYVIEK
VSRRERSRRPAAPFTTSSMQQEAYRKLNFTARKTMVVAQQLYEGLDLGKEGSTGLVTYIR
TDSTRVSGTAKEEAKEYIDKQFGQAYTGEQDGEIKGQKERKIQDAHEAIRPTSVFREPDQ
VKKFLTPEQYKLYRLIWSRFVASQMSPAIIDTTSVDIAAGEYTFRSAGSIVKFSGFMKVY
TEGNDDGQKEEIKTLPELAEGEKLELTELLPKQHFTQPPPRYTDASLIKLLEENGIGRPS
TYAPIVETIQKRGYVSRENKQFFPTELGFVVVEMLKEHFPEIIDVEFTADMEKKLDHIEE
GDTDWIKILEEFYGPFHETMEKAEEAIGKIELQDEVTEEICELCGRNMVIKFGRFGKFLA
CPGFPDCRNTKPLLEPTGVTCPLCSGEVVLRRTKKGRKFYGCSRYPECDFVTWDLPTNEK
CPSCNSMMVKKSSKNKQMLSCVNQECKLKIEMSEDKK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaacaaccttggttattgtggaatcaccagctaaggcaaaaagtatcggtaagttt
ttaggcaaaaaatacacagtcaaggcctcaatggggcacgttcgtgacttgccgaaaagc
cagttcggagtggatgtagaggccggttttatgcctaagtatattaccatcagaggaaaa
ggcgatactataaaggaactgcgttcagcagtaaaaaaagcagatactgtgctgcttgct
tccgaccctgatcgtgaaggggaagctatagcttggcacctgcagaaactattaaaaatt
gaggataaccagccttgccggatagaatttaacgaaataactaagcaggcaatccaaaat
gcggtaacacacccgcgtaagattgattacaacagagtaaatgcccagcaggcccggcgt
attttggaccgtctggttgggtataatttaagtcctttactttggcggaaggtaagaaaa
ggtttaagcgcaggtcgtgtgcaatcagttgctgtacgcttgatctgtgagagggaggaa
gaaattgattcctttgagcaggtggaatattggactttaaccggtaaatttctcaaggct
aaagccgggtttgagggaaaactgcttaaataccgcggcgaaaaattagaagtgtctgat
gaagagtcgatgcagaagattctacaggcattagaaggatcctcctatgtgatagaaaag
gttagccgtcgtgagagaagtcgtcgtcctgccgctccctttaccaccagcagtatgcaa
caggaggcttaccgtaaactaaattttacagcccgcaaaacgatggtggtggctcagcag
ctctatgagggcctggatttaggcaaggaaggttccaccggtctggttacatatattaga
actgattcaaccagggtttctggtacggctaaagaggaagccaaagaatatattgataaa
caatttggccaagcttataccggtgaacaagatggggaaatcaaagggcagaaggaaagg
aaaatacaggacgctcatgaggcaatacgtcctacttcagtattcagagaacctgaccag
gtaaaaaaatttttaacgccagagcaatataaactatatcgcctaatctggtcgcgtttt
gttgccagtcaaatgagtcccgcaatcattgatacaacaagtgtagatatagctgcaggt
gagtatactttcagatctgccggttccattgttaaattttccggctttatgaaggtgtat
actgaaggcaatgatgacggtcagaaagaggagattaaaacattgccggagctggctgaa
ggtgaaaaacttgaattaacggagttattacccaaacagcacttcacacagccgcctcct
cgttatactgatgcgtctctaattaaattactggaggagaacggtatcggtaggcccagt
acttatgctccaatcgttgagaccattcagaaacgcggttatgttagcagagaaaataag
caattcttcccaaccgagttaggttttgttgttgtggaaatgttaaaagagcattttcct
gagattattgatgtagagtttactgctgatatggaaaaaaagttagaccacatagaagag
ggagatactgactggattaaaatactggaggaattttatgggccttttcatgagacgatg
gagaaggctgaggaagctataggaaagatagaacttcaggatgaagttacagaagaaatc
tgcgaactgtgcggtagaaacatggtaattaagttcggtcggtttggaaaattcctggcc
tgtccaggttttcctgattgccgtaataccaaacctttactggaacccacgggtgtgacc
tgtcccctgtgctccggggaggtagtgctgcgccgaactaagaagggaagaaaattctat
ggctgcagcaggtatccggagtgtgattttgtgacctgggatttgcccaccaatgagaaa
tgtccctcttgcaacagtatgatggtgaagaaaagctctaaaaataagcaaatgctcagc
tgtgtgaatcaggaatgcaagttgaaaattgagatgagcgaagataaaaaataa
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