Desulfofarcimen acetoxidans: Dtox_1544
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Entry
Dtox_1544 CDS
T00986
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dae
Desulfofarcimen acetoxidans
Pathway
dae03420
Nucleotide excision repair
dae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dtox_1544
03430 Mismatch repair
Dtox_1544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dae03400
]
Dtox_1544
Enzymes [BR:
dae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dtox_1544
DNA repair and recombination proteins [BR:
dae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dtox_1544
MMR (mismatch excision repair)
Other MMR factors
Dtox_1544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
SLFN-g3_helicase
ResIII
DEAD
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ACV62407
UniProt:
C8VW55
LinkDB
All DBs
Position
1609670..1612096
Genome browser
AA seq
808 aa
AA seq
DB search
MMGNEPKYSLLIYTSEINESLASHITKQISRGIKIYLFTSDSLENYEKNHFLIKARQYGL
LYWEQIESSSIPDHELTIVDGVVSEDFLCKCICKTTNFNAEQFSIEHARTDVHLMISAGA
GTGKTTVMINRLLYLKHIDPSLSFAEIVMITFTNEAAVQMRQRLAEKLINYYHVTGQRKY
LEWLEDTQKMQISTVHAFAKYLLGTVGQELGFSPSVALRGYHFQKRRIIEKAIDEYALQY
PAEYQMFMYVPQFLLVNIVLYVNSVLENKSLSSDKIAQELDLGENIDNFVIFLRFILQRL
HVELKEFKNMENKWEISDLIRELERLQEVQDLQKGLPIRFLFIDEFQDTDVIQVKLLLWL
RKQLDCRLFVVGDEKQSIYRFRGADYTAFRQLEEGLGSEQVMQYPLQKNYRSTAKLLVQL
NPLFEQWNSKVIKFRYGPDDKLQSLSKDKDGVGLVHYVTWAKLGEILKSLGGRWKVNEST
AILVRSNQDVQDLTEWCQSLGFFCDGEVRGNFYRTVAVREFYIMLRVLINQNLQRDYFAL
HHSSYGANTLSNYIVLKEFNAEKRFLADLFQAQPDWQQWQAYREMANGYPVLQVLKRIIG
EIEPARVYARRFIDKMRKLQPDQDRDLLLKEAETCKIEYQLNLDYLLYILQKYFSDTVMT
WHGIEQFIRLKMQTDTDVLPMTASPEERSHRFRCMTVHKAKGLEFDHVILPVTDHQFLRD
DRQQVLLREESGSYIMGYQLNMQGNVFRNSYWEQLKSSENTEIVAEETRLLYVALTRAKK
NLYVHVKDKLARANTVNCWSDLLYGSEI
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaaatgaacccaaatactcattgctaatttatacttcagagattaatgaatcc
ttagctagtcatataactaagcaaatatcacgggggataaaaatttatctttttacaagt
gattctttggaaaactacgaaaaaaaccactttttgattaaagctagacaatacggtcta
ttatactgggaacaaatagaaagtagttctatacctgatcatgagttaactattgtagat
ggtgtagtttcagaagattttctttgcaaatgtatttgtaaaactactaactttaatgct
gagcaattttctatagagcatgcccggacagatgtgcatctgatgatttccgccggtgct
ggcaccggaaaaaccacagttatgattaatcgtctgctttaccttaagcacatagatccg
tctctttcttttgccgaaatagttatgataacctttaccaacgaagccgcggttcagatg
aggcagaggttggcggaaaagttaataaattattatcatgtaaccgggcagagaaaatat
ttagagtggcttgaggatacccaaaaaatgcaaatatcaactgtacatgcctttgccaaa
tacttactgggaacggttggccaagagttaggattttccccatcagtagctttacgcggg
tatcattttcagaaaagaagaataattgaaaaagctatagatgagtacgcactgcagtat
cctgcagaatatcagatgtttatgtatgtgccacagtttctactcgttaatatagtcctg
tatgtaaattcagtattagaaaacaagtcattaagcagtgataaaattgcgcaggaacta
gatttgggagagaatattgataattttgttatttttttgcgattcatattacaaagactc
catgtagaattaaaggaatttaaaaacatggaaaataaatgggagatatcagatcttatt
cgtgagctagagcgcctgcaagaagtacaagatttacagaaaggactacctattcgcttt
ttattcatagatgagtttcaggataccgatgtcattcaagttaagctgttgctctggcta
aggaagcagttggattgcaggctgtttgtggtgggagatgaaaaacagagcatttaccga
tttcggggagccgattatactgcctttcggcagcttgaggagggtttgggtagtgagcag
gttatgcaatacccccttcagaaaaattatcgcagcactgcaaaattattagttcagctg
aatcctttatttgaacaatggaacagtaaggtaataaaattcagatacgggccagacgac
aaactgcagtcgttaagtaaagataaagacggggtgggtctggtacactatgttacctgg
gccaaattaggtgagattttaaaaagtttgggtggaagatggaaggttaatgaaagcaca
gccatactagttcgttctaatcaagatgtgcaggatttaactgaatggtgccagtcattg
gggtttttctgtgatggggaggtaagagggaacttttatcgcaccgtggctgttcgagaa
ttttatattatgctcagggtactgattaatcagaatcttcagcgggactattttgccctc
caccattcttcctatggtgcaaataccttatccaattacattgttcttaaagaatttaat
gccgaaaaaagatttttagcggatttatttcaggcacagccggactggcaacagtggcag
gcatacagagaaatggcgaatggttatccggtattgcaagtgttgaaaaggattattggg
gaaattgagccggcccgggtttatgcccgtcgttttattgataaaatgagaaaacttcaa
ccggaccaggatcgggatttgctgttaaaagaggccgagacctgtaaaatagagtatcag
ctgaatttagattaccttttatatatactgcagaaatatttctcggatacagttatgacc
tggcacgggattgaacaatttatacgcctgaagatgcaaactgatacggatgtgctgcct
atgactgcatccccggaggagagaagtcaccgtttccggtgtatgacagttcataaagct
aagggcttggagtttgatcatgtgattttgcctgtaactgaccaccagtttttgcgtgat
gatcgccagcaggttcttttgcgggaggaaagcggcagttatattatggggtatcagcta
aatatgcagggaaatgtatttcgcaacagttattgggagcagcttaagtcttcggaaaac
accgagattgtggctgaagagacgagacttttgtatgtagccttaaccagggcaaaaaag
aatctgtatgttcacgtcaaggataaattagcccgggccaatactgttaactgttggagt
gatttgttatacgggagtgaaatctag
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integrated database retrieval system
