Desulfofarcimen acetoxidans: Dtox_2249
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Entry
Dtox_2249 CDS
T00986
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
dae
Desulfofarcimen acetoxidans
Brite
KEGG Orthology (KO) [BR:
dae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dae03009
]
Dtox_2249
Enzymes [BR:
dae01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Dtox_2249
Ribosome biogenesis [BR:
dae03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Dtox_2249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Cons_hypoth95
Methyltransf_25
Methyltransf_15
MTS
PrmA
Methyltransf_11
TRM5-TYW2_MTfase
UPF0020
RrnaAD
N6_N4_Mtase
PCMT
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
ACV63063
UniProt:
C8VZT5
LinkDB
All DBs
Position
complement(2420235..2421611)
Genome browser
AA seq
458 aa
AA seq
DB search
MADIPVPVKVNDIIELQINDINHQGAGVGRYHGFAVFVPFTCVGEIILATITEIKKSFAA
ASLVKVLKSSDNRQIHSCSEYMKCGGCQLQHSSYAEQLKLKEKFVRDNLKRISGLPDAVV
LPTIGMENPWNYRNKIHLHAGRKNNRTVLGFFSEGSHILVEGTACCQINDGRLNEISAIL
EDLINKYKLEPYNKHSKKGLLRGVMLRKAEATGQVMLVLVTVSGNLPGQSTFTRELVNQC
PDITSIIRNINNGNNSLLLGSVNKLIWGKEIIVDKIKDLSFYISANSFYQINPKQTIKLY
DKALEYAELKGNETVLDAYCGIGTIAMYFSANARKVTGLESLNIAVKDARENAALNRLNN
VEFLCGEVEKLLPEFAERNNNVDIIILDPPRQGCKQVVLEAIAKMRIPKIIYVSCNPGTL
ARDLGLLDKLGYGIIEVQPVDMFPQTSHIEICTFLSKI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatacccgtacccgtgaaagttaatgatataatcgaattgcagatcaatgat
attaatcatcagggagccggagttggtcgctatcatggctttgccgtttttgtaccgttt
acctgtgtaggagaaataatactggccactattactgaaataaaaaagagttttgccgca
gcgagtcttgtgaaagttttaaaatcctctgacaacaggcaaattcattcctgttctgag
tatatgaaatgcggtggttgccaactgcagcatagtagttatgccgaacaattaaagcta
aaagaaaaatttgttcgcgacaatttaaaacgtattagcgggcttcctgatgcagtggtt
ttgccaactatcggtatggaaaatccctggaactatcgtaataaaattcacctgcatgcc
ggcagaaaaaataacaggactgtcctgggttttttctccgagggttctcacatactggtt
gaaggtacagcctgctgccagataaatgacggtagattgaatgagattagtgctattctg
gaggatctgataaacaagtataagcttgaaccatataacaagcacagcaaaaagggtctc
ctgcggggtgtgatgctgcgcaaagctgaggctaccgggcaggttatgcttgtgctggta
actgtgagtggtaatttaccgggccagtcaaccttcactcgcgaattagtaaatcaatgc
cctgatataacatctattatcagaaatataaataacggaaataatagcttgctgctggga
agcgtaaataaactaatctggggaaaggaaataatagttgataaaataaaagacctgtct
ttttacatttcagccaactcgttttatcaaataaatccaaaacaaactattaagctttac
gataaagctctggagtatgccgaattaaaaggtaatgagacggtactcgatgcttactgt
ggaataggaaccatagccatgtatttttcagctaatgccaggaaggtcacaggattggaa
tcactcaacatcgcggtaaaggatgccagggaaaatgcggctttaaataggttaaataat
gtagagtttttgtgcggtgaggttgaaaaattattacctgaattcgcagaacgtaataat
aatgttgacattattatactggacccgcctcgtcaaggctgcaagcaagttgtccttgaa
gcaattgcaaaaatgaggatacctaaaattatctatgtgtcttgcaatcccggcacattg
gccagggatttgggtttacttgataaacttggctatgggataattgaagtgcagccggtg
gatatgtttccgcagacgagccatatcgaaatttgtacatttttgtcgaaaatataa
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