Desulfofarcimen acetoxidans: Dtox_2315
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Entry
Dtox_2315 CDS
T00986
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dae
Desulfofarcimen acetoxidans
Pathway
dae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dtox_2315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dae03400
]
Dtox_2315
Enzymes [BR:
dae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dtox_2315
DNA repair and recombination proteins [BR:
dae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dtox_2315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
HTH_24
MarR_2
HTH_23
Zn_ribbon_6
PIF1
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ACV63128
UniProt:
C8W073
LinkDB
All DBs
Position
complement(2483706..2485949)
Genome browser
AA seq
747 aa
AA seq
DB search
MSEQVYAEIVVDVPVRNVDRVFSYIVPADLFPAIKFGMRVIVPFAGRKVTGYVVGFSGIT
QVSQEKLKPVLAVLDNEPVITEELWTLARWMKAYYLCTLAQALKCMVSPAVRVKAAGSYT
GLWIGFADNQLAQVLAKLNRSPKQSAVIKAAAGQPGLSPKALADQVGVSSATVSALVGKG
LLQARTTSVRRNPYPIKPTGIPGPVLTPEQAYCAGEIIRAIESSQSQVFALHGITGSGKT
EIYLNVIARALVLGRKTLITVPEIALTGQMVNTFKERYGDTVAVLHSALSAGERYDEWQR
IRNGDSKIVLGTRSAVFAPLSGPGLLIIDEEHEAAYKQDDQARYHAREVALQRAKLSGAV
VILGSATMSLESYCRAQKEGPYRYLSIENRIEQKPLPQIKTIDLRAETHKGNPGIFSLAL
LQKIEEKIRLKEQTILFINRRGFSPIVICRDCGFVLKCPHCDISLTYHSDLTLRCHYCNY
ISPVINKCSNCASEQLRFAGTGTQKVEEEIRHIFPSAGVLRMDADTTSRKGAHAEILKNF
LDGKADILIGTQMLAKGLNLPNVTLVGVINADTTLHMPDFRAAEKTFQLLTQVAGRAGRG
EKPGEVIIQTYNPEHYSIKAALNNSYKDFYAQEMIIRRELGYPPFSRLIRIILSSTQSAL
VQSGAFLLKECLLEAQRDFNPHGPDILGPAPAPLHKIKEKYRWQIVLKGKQALILRQLAA
KGIDIFESRQGNRLLSIIVDVEPQNMM
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaggtttatgccgaaatagtagtagatgttccggtgcgcaatgtggaccgg
gtttttagttatatagtaccggcagatctttttccggcaattaaatttggcatgagggtt
attgttccttttgccggtcgtaaagttaccggttatgttgtcggtttttctggcattaca
caggtatctcaagaaaagctgaagcctgttctggcagtcctggataatgaaccggttata
acagaggaattatggactttagcccgttggatgaaagcttattatttatgcaccttggcc
caggcgctaaaatgtatggtttctcccgctgtaagggttaaagctgccggaagctataca
ggcttgtggatcggttttgccgataaccaactggcacaagtactcgccaagcttaaccgc
tcgcctaaacagtcggcggtaattaaagcggcggcgggccagcctggtttatcacccaag
gcactggctgaccaggtgggggtatcttcagcaactgtcagcgcgcttgtcggcaaaggc
ttgctgcaagccaggacaacttctgtaaggagaaatccttatccaattaaacctacgggg
attcctggccctgttttgacgccggaacaggcttactgtgccggagaaattattcgggcc
attgagtcttcccagagccaggtttttgctttacacggcatcaccggcagcggcaaaacc
gaaatttatttgaacgtaatagcacgggctctggtcttagggcgtaaaacacttataacc
gtgcctgaaatagccctgaccggccaaatggtaaacacctttaaggaaagatacggtgat
acggtagctgttttacatagcgctttatccgccggggaaaggtatgatgagtggcaaaga
atcaggaacggggacagtaaaatagtattgggtacccgctcagcagtttttgctccctta
tccggtcccggtttactgattattgatgaggagcacgaagcagcttataaacaagatgat
caagccaggtatcatgccagagaagtagccctgcaaagagctaaattaagcggagcggtg
gttattttgggcagcgccacaatgtcgctggaatcttattgtcgtgctcagaaggagggc
ccctaccgctatttgtcaatagaaaacaggatagagcaaaaacccctgccgcaaatcaaa
acaattgatttgcgcgctgaaacacacaagggcaatccgggcatttttagtctggcttta
ctgcagaaaattgaggaaaaaatcagattaaaagaacagactattttgtttattaacaga
agaggcttttcccctatagttatatgccgtgactgcggttttgttttaaaatgcccgcat
tgcgatatatcgcttacttatcacagtgatttgacactgcgctgtcattactgcaattac
atcagtccggttattaataaatgcagtaactgtgcttcagaacaactgagatttgccggt
accgggacgcaaaaagttgaagaagaaataagacatattttcccctctgccggtgtcttg
cgaatggatgctgatactacttcccgtaaaggtgcacacgctgaaatattgaaaaatttt
ttggacgggaaagcagatattcttattggcactcaaatgctggccaaaggtttgaactta
cctaatgttacactggtcggagttattaatgctgatactactttgcatatgcctgatttt
agggcagccgaaaagacttttcaactgttgactcaggttgcgggacgggcaggtcgtggt
gagaaacccggggaggtaatcatccagacttataatcccgagcattacagtataaaagcc
gcgctaaataacagttataaggacttttatgcacaggaaatgattatacggcgggagttg
ggctatccgcctttttcccgtttaatcagaattatactttcctctactcagtcagcactt
gtgcagagcggtgcttttttattaaaagaatgtttgctggaggctcaaagagattttaac
cctcatggacccgatatattaggaccggcgccggcgccactgcataaaataaaagagaag
taccgctggcaaatcgttttaaaaggaaaacaggctttgatccttcgccagctggcagca
aaagggatcgacatttttgagagccggcaaggaaacaggttgctttcaattattgttgac
gttgagccgcaaaacatgatgtga
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