Entry |
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Name |
(GenBank) DNA polymerase I
|
KO |
|
Organism |
dae Desulfofarcimen acetoxidans
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:dae00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dtox_2415
03410 Base excision repair
Dtox_2415
03420 Nucleotide excision repair
Dtox_2415
03440 Homologous recombination
Dtox_2415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:dae03032]
Dtox_2415
03400 DNA repair and recombination proteins [BR:dae03400]
Dtox_2415
Enzymes [BR:dae01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dtox_2415
DNA replication proteins [BR:dae03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Dtox_2415
DNA repair and recombination proteins [BR:dae03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Dtox_2415
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dtox_2415
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
2592681..2595347
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AA seq |
888 aa
MSLKSLTEAKNNTILVIDGNSLIHRAFHAIPLLSTADGLPTNAVYGFTNMLLKILNDIQP
KWVTVAFDKSKTTFRNQEYSEYKAHRKATPEELRPQFSLVKDVLNALSIKWLEAEGYEAD
DLIGTIVKKAEEEDADVVILSGDKDILQLVSDKTRAILTKKGITEIEEYNAENVYRKFGV
HPNQITDYKGLTGDPSDNIPGVPGIGPKTATKLLQDFDSVENILANLDKITSRARTLMEN
NSEQALLSKRLATIITNVPVQITLEQCIRTEPNEAELFNILKKLEFKKLLRDMLTAETGN
SNQIKQKHLINKQSYAVEYITLSEQEDFEDLLVQAQKSGKVALALQGRREKGLISVALCL
SEGQNYLLPLNSSTETTSFALKLLQNICVDSKIKKCCYDTKADLWLLHYYGIEINQPGFD
VMLADYLLNPGKSARSLPETALSHLDIVLQEGSETYLPASAEVISRLVDILQSKLLLQEQ
ENLYYDIELPLLKVLASMERTGVSVDKEQLQLMSEELNKKLQVLTTDIYEHAGEIFNINS
TKQLGSILFEKLKLKAGKKTKTGYSTDVTVLEELAGDHPVVSLLLEYRQLAKLKSTYVDG
LTGLINPQTGKLHTTFHQAVTATGRLSSSEPNLQNVPIRLDAGRKIRKFFVPCKPDNFIF
SADYSQIELRILAHIAQDNNLMDAFAKKQDIHTRTASEVFGVAMDEVTPEMRGRAKAVNF
GIVYGISDFGLAKDIKVTRKEAGRYINNYFNRYSGVKAYIDRVIREAREKGYVTTILNRR
RYLPDLFSSNRVVRSFGERTAMNTPIQGSASDIIKLAMVLIYREMRKRKLSSTMILQVHD
ELIFDVVASEVEEMQNLVKYYMENAVELSVPLVVDMKIGPNWYDVQKI |
NT seq |
2667 nt +upstreamnt +downstreamnt
ttgtcactgaaatctttaacggaagctaaaaacaataccattttagtaattgatggaaac
agccttatccaccgggccttccacgccatcccgcttttatcaacagcagatggtttgcct
accaatgctgtttacggtttcaccaacatgcttttaaaaattctcaatgatatacagccc
aagtgggtaacagttgcctttgataagagcaaaacaacttttcgcaaccaggaatacagt
gaatataaagcgcaccgcaaggccactccagaggaacttaggccacagttctctctggtt
aaagatgtcttaaatgcgttgtccattaaatggttagaagccgaaggttatgaggcggat
gatttaatagggacgatcgtaaaaaaagctgaagaggaagatgcggatgtagtcatactt
agcggtgacaaggatatattgcaacttgtctctgataaaacaagagccatcttaacgaaa
aaaggtatcactgaaattgaagaatataatgcagaaaatgtatataggaaattcggtgtt
cacccaaatcaaattactgattataagggactaaccggggatccgtctgacaatataccc
ggagttcctggcatcggccctaaaacagcaactaaactgctgcaagattttgattcagta
gaaaatattttagcaaatttagataagattacttcaagagcacgaactttaatggaaaac
aacagtgaacaggccttgttatcaaaaaggctggctacaattataacaaatgtccccgtg
caaataaccctggaacaatgtatcagaacagaacctaatgaagctgaattatttaatata
ctaaaaaaattagaattcaagaaactgctgcgagatatgttgaccgcagaaaccggcaat
tccaatcagattaaacaaaagcatctaataaacaaacagagctacgcggtagaatatata
accttatcagaacaggaggactttgaagatcttcttgttcaggctcaaaaaagcggtaag
gttgctctggctctgcaaggaaggagagaaaaaggcttaatatcagtagctctgtgctta
tcagagggacagaactacttattgccattaaattcaagtactgaaaccacgtcatttgca
ctaaaattattgcaaaatatatgtgtagacagtaaaataaaaaaatgttgttatgacact
aaagctgatttatggctgttgcactattacggtatagagataaaccaaccaggttttgat
gttatgcttgcggattacctgcttaatcccggcaaatctgcccgcagtctgcctgaaaca
gcactatcgcacttggatattgttctgcaagagggcagcgaaacatatttgccggccagt
gcggaagtcatttctcgcttggtcgatattttacaaagcaagctgctgctgcaggaacag
gaaaatctatattatgatattgaactgccgctgctgaaagtactggccagcatggaaaga
acaggcgttagtgtagacaaagaacaactgcagctgatgtctgaagaactaaataaaaaa
cttcaggtattaaccacggatatttacgaacatgcaggcgaaatttttaacattaattct
actaagcaattgggaagcatactctttgaaaaacttaaactcaaggcaggcaaaaaaacc
aaaaccggttattctactgatgttacagtgctggaagaactcgccggtgatcacccggtt
gtgtcattactcttggaatacaggcagttggcaaaattgaagtccacttatgtcgacggt
ttaaccggcttaatcaaccctcaaacagggaagctgcatactacttttcaccaggcagtt
acggctacgggaaggttatccagttcggaaccaaatctacaaaatgtaccaattagatta
gatgcaggcagaaaaatacgaaaatttttcgtgccctgcaagcctgataattttattttt
tcagccgactattcgcagatagaactgcgaattcttgcccatattgcccaggataataac
ttaatggacgcttttgctaaaaaacaagatattcataccagaactgcatcagaagttttc
ggagttgccatggatgaagttacacctgaaatgaggggacgggccaaggctgtgaacttt
ggtattgtttacggtatcagtgactttggcctagctaaggacataaaggtaacccgcaaa
gaagcaggaagatatattaataactactttaaccgttattccggagttaaagcctatatt
gaccgggtgattcgggaagccagagaaaaaggttatgtcactacgattttgaacaggcga
cgctacctgccggatttatttagttccaaccgtgttgttcgttccttcggagaaagaaca
gccatgaacacacccattcagggaagcgcgtctgatattataaaactggcgatggtttta
atttaccgggaaatgcgtaaaagaaagctttcctccaccatgattttacaggttcacgat
gaattaatttttgatgtagttgccagtgaagttgaagagatgcagaacctggttaaatat
tatatggaaaatgcagtagaattaagtgttccattggtggtagatatgaaaataggaccc
aactggtatgacgtgcaaaagatttag |