Desulfofarcimen acetoxidans: Dtox_3040
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Entry
Dtox_3040 CDS
T00986
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dae
Desulfofarcimen acetoxidans
Brite
KEGG Orthology (KO) [BR:
dae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dae03016
]
Dtox_3040
Enzymes [BR:
dae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Dtox_3040
Transfer RNA biogenesis [BR:
dae03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Dtox_3040
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
JAKMIP_CC3
Motif
Other DBs
NCBI-ProteinID:
ACV63792
UniProt:
C8W3K6
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All DBs
Position
complement(3236836..3237405)
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AA seq
189 aa
AA seq
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MQPIRLFWAVNLSSELKAKIAVLQSQLKKCGADVKWVDEENFHLTVKFLGDTEPEIVPVM
VKKMKQEVGGLGVFTLRIEKLGVFPGKGLPKVIWAGVNGKKDKFRNLYDRTQRSLRTLGF
APDKKPLSPHLTLGRVRSARGTKELTAAMASFNSSNCFLGDEIIDSVDLMRSELTRNGAI
YTIMESIVL
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccatacgtttgttttgggcagttaatctctcttcggaactaaaggcaaagatt
gctgtgctgcagtcacagctaaagaagtgcggggcggatgttaagtgggttgacgaggag
aattttcatttaacggtaaagtttttgggcgacactgaaccggaaattgtaccggttatg
gttaaaaaaatgaagcaagaagtaggaggcctgggggtttttactttaagaatcgaaaaa
ttgggggttttccccggcaagggattgccaaaagtaatctgggccggagtgaacgggaaa
aaggataaatttaggaatttatatgaccggacgcagcggtctctccggactctgggcttt
gcgcccgataaaaagcctttgtcgccgcaccttaccctgggcagggtacgctcagcccgt
gggaccaaagagttaacggcagctatggcttcttttaacagcagtaattgttttttagga
gatgagattattgactctgttgaccttatgcggagcgagcttaccaggaatggagcaatt
tatactataatggaaagtattgtattgtag
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