Desulfofarcimen acetoxidans: Dtox_3110
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Entry
Dtox_3110 CDS
T00986
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dae
Desulfofarcimen acetoxidans
Brite
KEGG Orthology (KO) [BR:
dae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dae03009
]
Dtox_3110
Enzymes [BR:
dae01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Dtox_3110
Ribosome biogenesis [BR:
dae03009
]
Prokaryotic type
ribosomal protein modification factors
Dtox_3110
BRITE hierarchy
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GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Spt6_S1
RIM2a_ZnF
Motif
Other DBs
NCBI-ProteinID:
ACV63862
UniProt:
C8W4H6
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All DBs
Position
complement(3306551..3307891)
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AA seq
446 aa
AA seq
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MTLKVGIVSLGCAKNLVDTEIMLGFLKRAGYSITNREKDAEVLVVNTCGFITEAKEEAIN
TILEMAQFKLGGKCRALLVAGCLAQRYAPELLKEMPEIDGILGIGSIGQIVSVIERVLAG
ERVREVGAPEYVFAETARILATPPYTAYLKIAEGCDNKCSYCAIPGIRGSFLSRKIDSIK
KEAAALAAQGVREAVLIAQDTTKYGFDLYGKFSLSNLIKELTLINDIEWIRLLYCYPSKF
TPELIDVLASEKKVCRYLDIPLQHASDSILLSMNRSGTAEQNRRLIEKLRQAVSGIALRT
SFIVGFPGETEADFQTLLDYMQEIRFDRVGIFVYSPEEDTPAAALDNQIAEDIKQDRYER
AMLLQQKISLENNRRKVGSVVSVLIEGIARNKEEGNFTYTGRSEFDAPGIDGKVLVETQE
KLSAGEIVPVLIKKAYEYDLIGELTR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgactttaaaagttggcatagtcagtcttggctgtgcaaaaaacctggtagacactgaa
attatgctgggtttcttgaagcgggccggttattctattaccaatcgtgaaaaggatgcg
gaggttctggttgttaatacctgtggttttattacagaggctaaagaggaagcaattaat
actattttagaaatggcccagtttaagttgggcggcaaatgccgggctcttttggtggca
ggttgcctggcccagagatatgctcccgaactgctgaaagaaatgccagaaatagacgga
attctgggtattggcagcatcgggcaaattgtttcggtaatcgagcgtgttttggccggg
gaaagagtgcgggaagttggggcgccggaatatgtttttgcagaaacagcgagaatattg
gctacaccaccctatactgcttatttgaaaattgccgagggctgtgacaacaagtgctcc
tattgtgccatacccggtattcgcggaagttttctcagtcgaaagattgattcaattaaa
aaagaagctgccgctttggccgctcagggtgtcagggaagctgttctcatagctcaggat
acgacaaaatacggttttgatttgtatgggaagttttctttatctaatttaatcaaggaa
ttaactctgattaacgatatagaatggattaggctgctctattgttatcccagtaaattt
acaccggaattgatagatgttctggcttctgagaagaaggtttgccgttatctggatatc
cctctgcagcatgccagtgattctatactgttgagtatgaacaggagcgggacagcggag
caaaacaggcggcttattgagaagttgcgccaggctgtttccggtatagcgctgcgtact
tcttttattgtcggttttccgggagagactgaagctgattttcaaacactgcttgattat
atgcaggaaataagatttgacagggtaggtatttttgtttattctcctgaggaggatact
cctgctgctgcactggataaccagattgctgaggatatcaaacaggatcgctatgaacgg
gctatgctgctgcagcaaaaaatctctctggagaataacaggcgaaaagtaggaagtgtt
gtctctgttttaatagagggtattgctcgaaataaggaagagggaaattttacatatacc
ggccggagcgagtttgacgcgcccggtattgacggaaaggtgcttgtagagactcaagag
aagctttcagcaggtgaaattgttccggtacttattaaaaaagcttacgagtatgacctg
ataggggagttaaccagatga
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