Desulfofarcimen acetoxidans: Dtox_3185
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Entry
Dtox_3185 CDS
T00986
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dae
Desulfofarcimen acetoxidans
Brite
KEGG Orthology (KO) [BR:
dae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dae03016
]
Dtox_3185
Enzymes [BR:
dae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Dtox_3185
Transfer RNA biogenesis [BR:
dae03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dtox_3185
Prokaryotic type
Dtox_3185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
HerA_C
Motif
Other DBs
NCBI-ProteinID:
ACV63927
UniProt:
C8W4P1
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All DBs
Position
complement(3384419..3385348)
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AA seq
309 aa
AA seq
DB search
MNGIINVLKPPGMTSHDIVNYIRRLTGIKKVGHTGTLDPGAAGVLPVCVGKATRVAEYLI
SYDKCYRAECTLGASTDTQDSFGRVLEVRDASCLAVGDIEAMLMTFVGSQEQIVPMFSAV
KVQGKKLYELARAGQRLEREARRINVYSIKLLDYEDLGTPAPRVLFEVTCSKGTYVRTIC
HDLGQRLGYGGYMSFLIRTRVGVFDLSKSVTLEELKEYADKGLLNRAMLPIDLVLSDMVA
VQVRESAVAAVKAGNRLYLPGIKEMPGCLAEDQIVRLRSGDKLLALARVMSEEKEGITKY
IFQPFKVLV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggataattaatgttttaaaaccacccggaatgacttcgcatgatatagttaat
tatattcgtcgtttaacagggattaagaaagtcgggcatacgggaaccctggatccgggt
gcggcaggggtactgccggtgtgtgtgggtaaggccacgcgggttgccgaatacctgatt
tcttatgataagtgttaccgtgccgaatgcactttgggagccagtaccgatacacaggac
agttttggccgggttctggaggtacgggatgcttcctgtcttgccgtcggtgatattgaa
gccatgctaatgacttttgtcggcagtcaggagcaaatcgtacctatgttttcggctgtt
aaagttcaggggaaaaaactttatgagctggcccgagccgggcagcggctggaacgtgaa
gcgcgcaggataaatgtatattcaattaaattgcttgactacgaggacctgggaacacct
gcccccagggttttatttgaagtaacctgctcaaaaggcacttatgtcagaaccatttgc
catgatctggggcaaaggcttggttatggcgggtacatgtcttttttgatcagaaccagg
gtaggagtatttgacctttcgaaatccgtgacgctggaggaattaaaggaatacgcggac
aagggcctgcttaaccgggcaatgctgcctattgacctggttttgagtgatatggtggca
gtgcaggtccgggaaagcgcggttgcagcagtgaaggcgggaaacaggttataccttccc
ggaataaaggaaatgcccggctgcctggcagaagatcaaattgtgcgtttgcgctcggga
gataagttattggctttagccagagtaatgtcagaagaaaaagaaggtatcaccaaatac
atatttcaaccgtttaaggtattagtttaa
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