Desulfofarcimen acetoxidans: Dtox_3254
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Entry
Dtox_3254 CDS
T00986
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
dae
Desulfofarcimen acetoxidans
Brite
KEGG Orthology (KO) [BR:
dae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dae03021
]
Dtox_3254
Transcription machinery [BR:
dae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dtox_3254
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_r3
DUF134
HTH_3
HTH_28
HTH_Tnp_ISL3
Sigma70_ECF
UPF0122
HTH_37
LexA_DNA_bind
Xre-like-HTH
HTH_31
KORA
HTH_1
HTH_AT3G52170
HTH_24
MarR_2
HTH_Tnp_1_2
HTH_10
HTH_Tnp_4
TnsD
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
ACV63989
UniProt:
C8W5I9
LinkDB
All DBs
Position
complement(3451879..3452598)
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AA seq
239 aa
AA seq
DB search
MGDFVPGQPGGAVDLNQAFQEYLVVKDEERLRQVMMSGSRLVRHFAKLYASGRQTEDLMQ
SGYEGLLKALGRFDSSRGVLFSTYAAHCIMGEIRHHIRKEASYACPAAVAELQARINRFV
DDYMKENGQIPSLSQIAEFVNVCEEGVVQAMRAGFVSLDEIELHKIQSLKYESFCLPIED
RIVLEQALYKLTELQQRVIHLLFYKDMTQTEAASQLGISQRSVSRILRKSLNLLSRILS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgatttcgtaccggggcagccgggcggtgcagttgatttaaatcaagcttttcaa
gaatacctggttgtaaaagatgaagagcgcttgcggcaggtgatgatgtccggcagcagg
ctggtgcgccattttgccaagctctatgcttccggccgccagacagaagatcttatgcag
tcaggttatgagggcttgctgaaggctcttggccgttttgattctagccggggggttctt
ttcagcacctatgccgcccactgcatcatgggtgaaataaggcatcatatccgcaaagaa
gcttcttacgcttgtcccgctgctgtggccgaactgcaggctcgtattaaccgttttgtt
gatgattacatgaaggaaaacgggcaaattccctccctcagtcaaattgcagagtttgtc
aatgtttgtgaggagggtgtggttcaggccatgcgggccggttttgtttccctggacgaa
atcgagttgcataaaattcaaagtctcaaatatgaaagcttttgtctgcctattgaggat
cgtattgttctggagcaggcattgtataaactgacagaactgcagcaaagagtcattcat
cttttattttacaaagacatgacccagaccgaggcggctagccagttaggcatcagccag
cgcagcgtgtcgagaattttacgcaagagtttaaatcttttgtccaggattttatcttaa
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