Desulfofarcimen acetoxidans: Dtox_3957
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Entry
Dtox_3957 CDS
T00986
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
dae
Desulfofarcimen acetoxidans
Pathway
dae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dtox_3957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dae03400
]
Dtox_3957
DNA repair and recombination proteins [BR:
dae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dtox_3957
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dtox_3957
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Microtub_bd
HI1402_helical
Kinesin
AAA_22
DUF87
DUF8810
DUF5937
Motif
Other DBs
NCBI-ProteinID:
ACV64650
UniProt:
C8VY21
LinkDB
All DBs
Position
complement(4140430..4142454)
Genome browser
AA seq
674 aa
AA seq
DB search
MDLKIRSEFTPRGDQPQAIAQLVDGLGKKYDKQILLGVTGSGKTYTMAKVIEEVQRPALI
LAPNKTLAAQLCSEFKEFFPNNAVEYFVSYYDYYQPEAYIAHTDTYIEKDSSLNDEIDKL
RHSATCALFERRDVVIVASVSCIYGLGDPEEYSTLVLSLRQGVEYDRDAILRKLVDIQYE
RNDINFTRGTFRVRGDVIEIFPVAATEQAIRVEMFGDEVEKLLQFDVLTGEITGQRQHIS
VFPASHYATSKEKMEEAISRIESELEQRLAELRKQDKLLEAQRLEQRTNYDIEMMREMGF
CNGIENYSRHLTGREAGQPPYTLLDYFPDDFIMFIDESHVAVPQIGGMYEGDRSRKASLI
EHGFRLPSALDNRPLQFNEFEERVKQVIYVSATPGAYELKHHRQIVEQVIRPTGLVDPEI
IIRPTRGQIDDLLMEIRLREKRDERVLITTLTKKMAEDLTDYFKENGVKVRYLHSDINTL
ERMEILRDLRLGVFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSERSLIQTTGRAA
RNVEGKVIMYADRITESMSKAINETERRRKKQLDFNEKYNITPQTVRKAVRDVLEATKVA
ESKVPYAVSGKAKMSKKDLIKMIAGMEKEMKEAARQLEFEQAARLRDTIIELRLKLRGEK
NIKAAIPDDGEIAY
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaataagatccgaatttacacccaggggagaccaacctcaggctattgct
cagttggtagacgggttgggtaaaaaatatgataaacagatacttttaggagttaccggc
agcggcaagacttataccatggctaaagtaatagaagaagtgcaaaggcctgccctgatt
ctggcacccaataagacactggcagcccagctttgctccgagttcaaagagttctttccc
aacaatgcagttgaatatttcgtcagttattatgactactaccagccggaggcttatata
gcccataccgatacctatatagaaaaggattcttccctcaatgatgagatagacaaactg
cgccactctgccacctgtgcactgtttgagcggcgggatgtagtcattgtagccagtgtt
tcctgtatttacggcctgggtgacccggaggaatacagcacgctggtgctttctctgcgg
cagggagtggaatatgacagggatgccatactgcgcaagctggtggatatccagtatgag
cgcaatgacataaactttacccgcggcacttttcgcgtgcggggcgatgtcatagaaatt
tttccggtagctgccactgagcaggctatcagagtggagatgtttggggatgaggtggaa
aaacttttgcagtttgacgttctgaccggtgagataaccgggcagcgccagcatatttct
gtctttccggccagccactacgccacctccaaggagaaaatggaggaggccatcagccgt
attgagtcagagctggagcaaaggttggccgagctgcgaaaacaggataagctgctggaa
gcgcagcgccttgagcagagaactaactatgatattgagatgatgagggagatgggcttt
tgcaacgggattgagaactattcccgacacctgaccggcagggaggcgggccagcccccc
tatactttgttggattattttcctgatgatttcattatgtttatagatgagtcgcatgtg
gctgtgccacaaattggcggcatgtacgagggggacaggtcgcggaaagcctcgttgatt
gaacacggttttcgcctgccttccgcactggataaccgtcccctgcagtttaatgagttt
gaggagagagttaaacaggttatatatgtttcagcaactcccggtgcttatgaattaaaa
catcacaggcaaattgtggaacaggtaattcgccccaccggtttggttgacccggaaatt
atcattcgcccgaccagaggacagattgatgatctgctgatggaaatccgactgagagaa
aaacgtgatgagagagttcttataactaccctgaccaagaaaatggccgaggatttaact
gattacttcaaagaaaacggggtaaaagtgcgttacctgcattccgacatcaatacgctg
gagcggatggagatactgcgtgatttgcgtttgggtgtttttgacgtgctggtgggaatt
aacctcttgcgcgaaggcctggatttgcctgaagtaagcctggtggctatactggacgcg
gataaggaaggcttcctgcgctccgagcgttcactgatccagactacaggccgggcggcc
cgtaatgtggagggtaaggtgattatgtatgcggacaggattactgaatctatgtccaaa
gcgatcaatgagactgaacgccgccgcaaaaagcagctggacttcaacgaaaaatacaat
attacgccgcaaacagtgcgcaaggcggtgcgcgatgtattggaagctactaaggtggct
gaaagcaaggtgccttatgctgtctccggtaaggcgaagatgtccaaaaaggatttaata
aaaatgattgccgggatggaaaaagagatgaaagaggcagccaggcagttggaattcgag
caggcagccagattaagggatactattatcgaactgcggctaaaattacgcggtgagaaa
aacattaaagcagccatacccgacgacggggagatagcttattaa
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