KEGG   Desulfofarcimen acetoxidans: Dtox_4202
Entry
Dtox_4202         CDS       T00986                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
dae  Desulfofarcimen acetoxidans
Brite
KEGG Orthology (KO) [BR:dae00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dae02048]
    Dtox_4202
Enzymes [BR:dae01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Dtox_4202
Prokaryotic defense system [BR:dae02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Dtox_4202
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII T1RH-like_C DGKI
Other DBs
NCBI-ProteinID: ACV64870
UniProt: C8VZC5
LinkDB
Position
complement(4380162..4383266)
AA seq 1034 aa
MPDHTIFDERPESQERAIKVLEKLGYQYVPRSRAEIFRGRLSHVLFPDVLREFMHRQSFV
YRGKQTPFSERSIGKAIKDIDVPLISGLMSAGKNIYDMLISGNSYEEELFDGGRQSFDLK
FIDWEHPENNLWQVTDEFSVERADGKYVWPDIVLLVNGLPLVVIECKKSGIDVEKGVAQN
TRNWQPDYIPHLFKYAQIIMAMNLNTVKYGTCGTTAEHFSVWREKNYQWQQEKCSNVSPD
GKVTAQDRTIVSILSKERLLELMRYFILYDNNVKKIARYQQFFAVQATMKRIKGEDNKGA
RGGVIWHSQGSGKSLTMVMLVKKIIADPDIGNPRFVLVNDRVNLDKQLRDNFARTQLRPV
RASTGKGLIDLLRDKSETIITTLVHKFYTAAKKRVKIEDDNIFLLVDESHRSHSSELHDF
MIDVLPNAIKIGFTGTPLLKKHKLNTYAQFGPLIDSYPITRAVEDGVIVPLVYEGRIIPQ
DVTSEKIDDYLKYIIAPLNHERQEDMKRKWSRLLPLAQTRQRIDMVAFDIHEHFISYAGP
KGFKAMIAASSRPAAIDLHRSIKKLGGIKTAVVISPENVKEGDELTGENKEKIRSFFKEE
VEPLFGHNYEEYGEWAKNSFIGGEDVDMLIVKDMLLTGFDAPVAAVLYVDKPMREHALLQ
ALARVNRVYPGKDFGLIVDYWGIFSKLNTAMDMYADEKSGMDGYDQADIENAILGAVDQK
RKLERAHSELRLVFEGKDFDRNSSDGWQSALADSDLRKVFYEKLSVFSRLLDLAMGSYAF
YSAIGYDRIQQYKRDLLHFQKLRGAVLLRYNEKVDFSKYEDGIRSLLNNFVLSEPSRIIV
EPVSIHDTEGMKAQLEKLDSKAAKGDAIRTRMDKELETCRYDDPLLYKRFFAQVQETLEV
YKASRNDDVYFFEMEKMADDFKKGYTGHHYPACIDNDSDAKAFYGIIQSIIAEVIYDITP
EIDEGMGQLAIEVKNAICSRAKVDWRHNVAVHKDMEQALDDLIWDFAEQYQIKLSVEKID
LMLEELRKTAISRY
NT seq 3105 nt   +upstreamnt  +downstreamnt
atgcccgaccataccatatttgacgaacgccctgaaagtcaggagagggcaattaaagta
ttggaaaagttaggctatcagtatgtaccccggtcacgggcagaaatttttcgaggacgg
ctttctcatgttttatttcctgatgttttgcgagagtttatgcaccggcagtctttcgtt
tatagaggaaagcaaacgcctttttccgaacgttctatcggcaaggccattaaggatatc
gacgtgccgcttatttccgggttgatgtcggccggcaaaaacatctatgatatgcttatt
tccggcaacagctatgaggaggaattatttgatggaggccgtcagtcttttgatctaaag
tttattgactgggaacatccggaaaacaatctatggcaggtgacagatgaattttcagtg
gagcgggcggatggcaaatatgtgtggccggatatagtgctgcttgtcaatggtcttcct
ctggtggtgatcgagtgcaaaaaatccggtattgatgtggaaaaaggagttgctcaaaat
acacgcaactggcaacccgactatattccccatctgtttaaatatgcgcaaatcattatg
gccatgaatctaaacactgtaaaatatggaacttgtggtacgactgctgagcattttagc
gtctggcgggaaaaaaattatcaatggcagcaggaaaaatgcagcaatgtcagccctgac
ggcaaagtcactgcacaggacagaactattgtttccatactctccaaagagagattgctg
gaattgatgcgttattttatcctatatgacaataatgtcaagaaaattgcccgctatcaa
cagttttttgctgtacaggcaaccatgaaacgtataaagggggaagataacaaaggtgca
aggggtggtgtgatctggcacagccagggcagcggtaaatctctcaccatggtgatgctg
gttaaaaaaataatagctgacccggatatcggaaatcctcgttttgtgcttgtcaatgat
cgggtcaatctggataagcagctgagggacaactttgccagaactcagctcagaccggtc
cgggccagtacaggcaagggtctgattgatttgttaagggacaaaagtgaaactataatt
actactcttgtacataaattttatacagcagcaaaaaagagagtcaagattgaagatgac
aatatttttttgctggtggacgaaagccatcgctcacactcaagtgaacttcatgacttt
atgattgatgttctgcctaatgctataaaaataggttttaccggcacgccgctgcttaag
aaacacaaattaaatacctatgcgcagtttggaccgcttattgacagttaccctattacc
agggctgttgaagacggtgttattgttcctcttgtctatgagggcaggattattccacaa
gatgtgacgagtgagaagattgatgattatctcaaatatattattgcgccgctgaatcac
gagcggcaggaagatatgaagcgcaaatggagccgtcttttacctctggctcaaactcgt
caacgcatagacatggtggcttttgacattcatgagcactttataagttatgccgggcct
aagggattcaaggctatgattgcagcatcatctcgtccggcagctattgacctgcataga
tcgataaagaaacttggcgggataaaaacagcggtggtgatatcgcccgaaaatgttaaa
gaaggtgatgagcttaccggtgaaaataaagaaaaaataagatcctttttcaaggaagag
gtggagcctctctttggacataactatgaggaatatggtgaatgggctaaaaacagcttc
attggtggtgaagatgtggatatgcttattgtcaaggatatgttgctaaccggctttgac
gcgccggttgctgctgtgctgtatgtggataaacccatgagggagcatgctttgttgcag
gcccttgcccgcgttaaccgcgtttatccgggcaaagacttcgggctcatcgtggattat
tggggtatttttagcaagcttaatactgccatggatatgtatgcggatgagaaatccggt
atggacggatatgatcaggcggatattgaaaatgctattcttggtgccgttgatcaaaaa
cgcaagctggaaagggcgcacagtgaattgcggcttgtttttgagggaaaggattttgat
cgaaacagttccgatggttggcaaagtgcattggcagatagtgacttgagaaaagttttt
tatgaaaagctttcagtattttcccgcctgctggatttggccatgggaagctatgctttc
tatagcgccattggttatgaccgtattcagcaatacaagcgggatttgcttcatttccaa
aagcttcgcggggcggtcttgcttcgttataatgaaaaagtagattttagtaaatatgaa
gacggtattcgcagcctgttgaataattttgtgctttccgaaccaagccggattattgtt
gaacctgtttctattcatgataccgaagggatgaaagcgcagcttgagaagctggatagc
aaagccgccaaaggggatgccattcgtacgcgtatggacaaagagctggaaacctgtcgt
tatgatgaccctttactatataagaggttttttgcgcaggtccaagaaaccctggaagta
tacaaagcctcaagaaatgatgatgtttatttctttgaaatggagaaaatggcggatgat
tttaaaaaaggctataccggccatcactaccctgcgtgtattgataatgacagtgatgcg
aaagctttttatggcataattcagagtatcattgctgaagtcatatatgatataacgccg
gaaatagatgagggcatggggcaactggccattgaggtcaaaaatgccatttgcagtcgt
gcaaaggtggattggcgtcataatgttgctgtgcacaaagacatggaacaagctcttgat
gatctgatttgggattttgccgagcaatatcaaataaaattatccgttgaaaaaatcgat
ctcatgctggaagaactaagaaaaacagcaattagcaggtattag

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