Diaphorobacter aerolatus: H9K75_00760
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Entry
H9K75_00760 CDS
T06773
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
daer
Diaphorobacter aerolatus
Pathway
daer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
daer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
H9K75_00760 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daer03400
]
H9K75_00760 (sbcB)
Enzymes [BR:
daer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
H9K75_00760 (sbcB)
DNA repair and recombination proteins [BR:
daer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
H9K75_00760 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H9K75_00760 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H9K75_00760 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QNP48802
UniProt:
A0A7H0GKI6
LinkDB
All DBs
Position
152432..153880
Genome browser
AA seq
482 aa
AA seq
DB search
MQSHTFLWHDYETFGADTRRDRPAQFAAIRTDAELNEIGEPLMFYCKPTPDYLPDPVSCL
ITGITPQLCLQKGLSETEFAARIEAELAFPGTIGVGYNTIRFDDEITRFMFWRNLIDPYA
REWQNQCGRWDLLDVVRMTRALRPDGIQWPTNDEGQVSFKLELLTKANGLAHEAAHDALS
DVRATIALARLIRQHQPKLFDYALSLHKKDRVVAELRLPASIDQARAFLHVSGMVPTERG
CLAVMLPIASHPTNKNEVLAWDLSHDPRELADLDVETIRLRMFTRAADLPEGMARLPIKT
IHLNKSPMVVGNVNTLSDAMAERWGLDMQAAAHNAQLARELPDMSAIWKEVFTRPQQEAL
DVDQDLYGGFVGNEDRRRLNHLRSLSPEELKTARTGFDDPRLAELFWRYRARNFPDTLSP
EDLQRWEGLRRDLLVDGMGGARTFDMLFAQLDELGESAESERDAGLLEAVYDYAESISPD
LS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcccatactttcctctggcacgactacgaaaccttcggtgccgacacgcggcgt
gatcgtcctgcgcagtttgcggcgatccgtaccgatgccgaactcaatgaaatcggcgag
ccgctgatgttctattgcaagccgacgccggactatctgcccgatccggtgtcgtgcctg
atcaccggcatcacgccgcagctatgcctgcaaaagggtctgtccgagaccgagttcgcc
gcgcgcatcgaagcggagctggcgtttccgggcaccattggcgtgggctacaacaccatc
cgttttgacgacgagatcacgcgcttcatgttctggcgcaatctcatcgacccctatgcg
cgcgaatggcagaaccagtgtgggcgctgggatctgctcgacgtcgtgcgcatgacgcgc
gcgcttcggcccgatggaatccaatggccgaccaacgacgaagggcaggtgagcttcaag
ctcgaactgctcaccaaggccaatggtctggcgcacgaggccgcgcacgatgcgctgtcg
gacgtgcgcgcaaccattgcgctggcgcggctgatccgccagcaccagcccaagctgttc
gattacgcgctcagtcttcacaagaaagaccgggtggttgcggaattgcggcttcccgcc
tcgatcgatcaggcgcgcgcgttcctgcatgtatcgggcatggttccgacggagcgcgga
tgtctcgcggtgatgctgccgattgccagtcacccgacgaacaagaacgaggttctggcc
tgggatctgtcgcacgacccgcgcgaactcgccgatctggatgtggagacgatccgcctt
cgcatgttcacgcgcgcggcagacctgcccgaaggaatggcgagattgccgatcaagacc
atccatctgaacaagtcgccaatggtggttggcaacgtgaacacgctcagcgatgcgatg
gcggagcgctggggactcgacatgcaggccgccgcgcacaacgcccagcttgcgcgcgag
ttgccggacatgagcgcgatctggaaagaggtcttcactcgcccgcagcaggaagcgctc
gacgtggatcaggacctctacggcggctttgtcggcaacgaggatcgccgccgcctgaat
catcttcgcagcctgtcgcctgaagagttgaagacggcacgcaccggcttcgacgacccg
cgtcttgccgaactgttctggcgctatcgcgcgcgcaactttccggacactctgtcgccc
gaggacctgcagcgctgggaaggcctgcgccgcgacctgctggtggacggcatgggtggt
gcgcgcaccttcgatatgctgttcgcacagctcgacgagctgggggagagcgccgaaagc
gagcgcgacgccggattgctcgaagccgtctacgactatgccgagtcgatttcgccggac
ctctcgtga
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