Diaphorobacter aerolatus: H9K75_11230
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Entry
H9K75_11230 CDS
T06773
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
daer
Diaphorobacter aerolatus
Pathway
daer02020
Two-component system
daer02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
daer00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H9K75_11230
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H9K75_11230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
daer03021
]
H9K75_11230
Transcription machinery [BR:
daer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H9K75_11230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QNP50294
UniProt:
A0A7H0GPS8
LinkDB
All DBs
Position
complement(2407355..2408950)
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AA seq
531 aa
AA seq
DB search
MKPGLSLRVSQHLALTPQLQQSIKLLQLSTLELEQEVEQMLDDNPFLERTTEGAEREEFG
IERADQPVSEDAADADSALYPAASASSTATSSEDQAAPDADAASAASESSEQVDWEGDGT
VEMAPDDGEWGGDAPARSSTSGSGDEETDAIDLAGAHESLSDHLHRQALALHLSDIDSAA
VRFLIESLNDDGYLEESLAELAIALAGNDAPTEELEELVHRFTVGLRLLQSLDPAGVGAR
NLSECLTLQLHAMNLDEEGDPAMIAVALRICRDSLDLLARKDVKRLMQACGAGEDSTRAA
MNLIARLEPRPGRRFADVQRQIIVPDVIVKNVGRGAQMRFTVQLNPDVMPRLRVHDVYAN
ALRGQRGNEANAGLQQRLQEARWFIKNVQQRFDTILRVSTAIVERQKNFFVHGELAMRPL
VLRDIADELGLHESTISRVTTAKYLSTPQGTFELKYFFGSGLGTETGGSASSTAVKALIK
QLLSSESPKKPLSDSKIADMLAEQGIECARRTVAKYREALKIPPANLRKAV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccggactgtcgctgcgcgtttcgcagcatctggcactcacgccgcagttgcag
caatcgatcaagctgctgcaactgtccacgctcgaactcgaacaggaagtcgagcaaatg
ctcgacgacaacccgttcctggagcgcacgaccgaaggcgcggagcgcgaagaattcggc
atcgagcgtgcggatcagcccgtaagcgaagacgccgcagacgcggacagcgcgctgtat
ccggcggcctccgcgtccagcaccgctacctcgtccgaagatcaggcagcgccggatgca
gatgctgccagcgccgcttcggaatcgtccgagcaggtcgattgggagggcgacgggacc
gtcgagatggcccccgacgatggcgagtggggcggtgacgctcccgcgcgtagcagcacc
agcggttcgggcgacgaagagaccgatgccatcgatctggcaggcgcgcacgaatccctg
agcgaccacctgcaccgccaggcgctggcgctgcatttgtcggacatcgacagcgcggcg
gtgcgtttcctgatcgagtcgttgaacgacgacggctatctcgaagagtcgctcgccgaa
ctggccattgcgctggccggcaacgacgcgccgaccgaagagctggaagaactcgtgcat
cgcttcacggtcggcctgcgtcttttgcagagtctcgatccggcgggtgtcggcgcgcgc
aatctgagcgagtgcctgacgctgcaattgcacgccatgaacctcgacgaagagggcgat
ccggccatgatcgcggtcgcgttgcgcatttgccgcgactcgctcgacctgctcgcgcgc
aaggacgtcaagcgtctcatgcaggcctgcggcgcgggggaggattccacacgcgccgcg
atgaacctgattgcgcgcctggagccgcgtcccggtcgccggtttgccgacgtgcagcgc
cagatcatcgtgcccgacgtgatcgtcaagaacgtcggtcgcggcgcgcagatgcgtttt
accgtgcaactcaatcccgacgtgatgccgcgactgcgcgtgcacgacgtttatgccaac
gcgctgcgtggccagcgcggcaacgaggccaacgcggggctgcagcagcgtcttcaggaa
gcgcgctggttcatcaagaacgtgcagcagcgctttgacaccatattgcgcgtctcgacc
gccatcgtcgagcgccagaagaacttcttcgtgcacggcgaactcgccatgcgcccgctg
gtgctgcgcgacatcgccgatgaactcggcctgcacgagtccaccatcagccgcgtgacc
acggccaaatacctgtcgacgccgcagggcacgttcgagctcaagtatttcttcggctcg
ggccttggcaccgagaccggcggcagcgcgtcgagcacggcggtgaaggcgttgatcaag
cagttgctgagttccgaaagcccgaagaagccgctctcggacagcaagatcgccgacatg
ctcgccgagcagggcatcgagtgcgcgcgtcgcaccgtggccaagtaccgcgaggcgctg
aagattcctccggccaatctgcgcaaggcggtctga
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