Danio aesculapii (panther danio): 130214432
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Entry
130214432 CDS
T11734
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
daes Danio aesculapii (panther danio)
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
daes03009
]
130214432 (ddx52)
Enzymes [BR:
daes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130214432 (ddx52)
Ribosome biogenesis [BR:
daes03009
]
Eukaryotic type
90S particles
Helicases
130214432 (ddx52)
SSDB
Ortholog
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SNF2-rel_dom
Cas3-like_C_2
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
130214432
NCBI-ProteinID:
XP_056302098
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Position
21:12154242..12209815
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AA seq
607 aa
AA seq
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MDAFDLFRKLGSGAKFDLKRFAKDAERFKLGKSQSKDSSDQLAGISFFGREKQEDTFLDS
RPNEDDAEEEREASGEEQKQATESVKAARKKKKGAKRKSEEPETRDGEGIQWMSLQNKMK
EPKQESKDKPSLKRLKQLHNEKVNRIRHQNRINVHGTDIPDPVSTFEELQKEYDLDPRII
HNIKAAGFQTPTPIQMQAVPLMMHKREILACAPTGSGKTMAFCLPLLAHLRQPLNKGFRA
LIISPTRELATQTHRELLKLSEGVGFRVHMINKGVEAVKKYGPKSAKKFDILVTTPNRLI
YLLNQDPPAINLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSSPNIRRVLFSATFA
TDVERWCRLNLDNLVSVSIGARNSAAETVEQQLLFVGSENGKILAMRNLIKQGFLPPVLV
FVQSIDRARELYHELVYEGINVDVIHADRTQQQRDNVVSSFRSGKIWVLICTALLARGID
FKGINLVINYDFPTSAVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSIATVIKKAGCP
VPDYMIGFKKIKSKLKHQLVTKPPRRATIRTTPRMLFDRKLGKGKRKKRKATAKEAKGEA
SEVISNC
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctttgacttgtttagaaagcttgggtcaggagcaaagtttgatttaaaaagg
tttgcaaaagatgcagagcgatttaagctaggaaagtctcagagcaaggacagctcagat
cagctggccggaataagcttttttggcagagaaaaacaagaggacacatttctggattcc
agaccaaatgaagatgatgctgaagaagagagagaagcgagtggtgaagagcagaaacag
gctacagagtcagtgaaagctgctcgaaagaaaaagaaaggagccaagagaaaatctgaa
gagcctgagacaagagacggagaagggatccaatggatgtctttgcaaaacaagatgaaa
gagccaaagcaagagtcgaaagacaagccttctttaaaaaggctaaagcagcttcataat
gagaaggtgaatcgaatacggcatcagaaccggattaatgtgcacggaacagacatccca
gatcccgtttccacttttgaggagctgcagaaagagtatgatctggacccacgaatcata
cacaacatcaaggccgcgggtttccaaactccgacacccattcagatgcaggctgttcca
ctcatgatgcataaaagagagatcctggcgtgtgctcctacaggctccgggaagaccatg
gccttctgtctgccactgcttgcccaccttcgtcagcccctcaataaaggtttcagagcc
ctcatcatctcccccaccagagagctcgccacacagactcacagagagctgctcaagctg
tcagaaggagtgggtttcagagttcacatgatcaataaaggagttgaagctgtgaaaaaa
tatgggcccaagtctgcaaagaaatttgatatactggtgacgactcctaacagattgata
tatttacttaatcaagaccctcctgctatcaacttaagtagtgtggagtggctggtggtg
gatgagtctgataagctctttgaggatggaaagactgggttcagagagcagcttgccacc
atcttcctggcctgctcttctcccaatatccgcagggttctcttcagcgccacgtttgca
acagatgtcgagcgatggtgcagactgaacctggacaaccttgtcagtgtcagcattgga
gccaggaactctgcagctgaaactgtggagcagcagctgctgtttgtgggttcagaaaat
ggaaaaatcctcgccatgagaaacctcataaagcaggggtttctgccgcctgtgttggtg
tttgttcagtcgattgatcgagccagagagctgtaccatgagctggtgtatgagggcata
aacgtggatgtgatccatgcagatcgcacacaacaacagagggataatgtggtgagcagt
ttccgctcaggaaagatctgggtgttgatctgcactgctcttctggctcgaggcatcgac
ttcaagggcatcaatctggttatcaactatgactttcctacttcagctgtggagtacatc
catcgcatcggccgaacaggaagagcaggacacaaagggaaggccgtaactttcttcact
gaggacgacaaacctctcctgcgcagcattgctacggtcataaagaaggctggatgtcct
gttcctgactacatgatcgggttcaagaaaatcaaaagcaaattgaagcaccagcttgtg
acaaaaccacccagacgggccactattcgcacgactccacgcatgctctttgacaggaag
cttggcaagggaaaaagaaaaaagagaaaagccacagcaaaagaagcaaaaggcgaagca
tcagaagttatttctaactgctga
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