KEGG   Danio aesculapii (panther danio): 130216267
Entry
130216267         CDS       T11734                                 
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
daes  Danio aesculapii (panther danio)
Pathway
daes03013  Nucleocytoplasmic transport
daes04141  Protein processing in endoplasmic reticulum
daes04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:daes00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130216267 (sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130216267 (sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    130216267 (sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:daes03019]
    130216267 (sec13)
   04131 Membrane trafficking [BR:daes04131]
    130216267 (sec13)
Messenger RNA biogenesis [BR:daes03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     130216267 (sec13)
Membrane trafficking [BR:daes04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    130216267 (sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    130216267 (sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    130216267 (sec13)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WDR55 Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_EML NBCH_WD40 Beta-prop_WDR36-Utp21_2nd
Other DBs
NCBI-GeneID: 130216267
NCBI-ProteinID: XP_056304140
LinkDB
Position
22:complement(30173690..30197878)
AA seq 320 aa
MVSVMNTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENSTWDKMYEYTGHDSSVNSVCWGPYDFGLIL
ACGSSDGAISVLTCSGDGHWDIKKINNAHTIGCNAVSWAPAVVPGSLIEQPTGQKPNYIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACIS
DVNKGQGAVSSITDSQQSEQ
NT seq 963 nt   +upstreamnt  +downstreamnt
atggtttcggtcatgaacacagtggacacctcccacgaggacatgatccatgatgctcag
atggattattacggcaccagactggccacctgctcctctgatcgctccgtcaagatcttc
gacgtcaagaacggaggacagattcttgtggctgatttaagaggtcatgagggtccggtg
tggcaggtggcctgggctcatcccatgtacggcaacatcctggcatcctgctcctatgac
aggaaggtgatcatctggaaagaggagaacagcacctgggacaaaatgtatgaatacaca
ggccacgactcctccgtcaattcggtttgctggggcccttacgacttcggcctgattctg
gcctgcggcagctcagatggggccatctcagtgttgacctgctctggagacggacactgg
gatattaagaagatcaataacgcacatactatcggctgtaatgcagtgagctgggcccca
gctgttgtcccagggagtcttattgagcagccaacaggacagaagcccaactacatcaag
agatttgtgtctggaggctgtgacaatctggtcaagctgtggaaggaagaagacggccag
tggaaagaggaccagaagctggaggcgcacagtgattgggtgagagatgttggatgggct
ccttctattggtctgccgaccagcacaatcgccagctgctcacaggatggtcgcgtgttc
atctggacgtgtgatgacccggctggtaacacctggacggccaagctcctccacaaattc
aatgatgtggtgtggcacgtgagctggtccatcactggaaacatcctggctgtgtctgga
ggagacaacaaggtgaccctgtggaaggagtcagtggatggacagtgggcttgtattagt
gacgtcaacaaaggccagggggccgtgagctccatcacagacagccaacagagcgagcag
tga

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