Danio aesculapii (panther danio): 130216267
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Entry
130216267 CDS
T11734
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
daes Danio aesculapii (panther danio)
Pathway
daes03013
Nucleocytoplasmic transport
daes04141
Protein processing in endoplasmic reticulum
daes04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130216267 (sec13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130216267 (sec13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
130216267 (sec13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daes03019
]
130216267 (sec13)
04131 Membrane trafficking [BR:
daes04131
]
130216267 (sec13)
Messenger RNA biogenesis [BR:
daes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130216267 (sec13)
Membrane trafficking [BR:
daes04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
130216267 (sec13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130216267 (sec13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
130216267 (sec13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WDR55
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
130216267
NCBI-ProteinID:
XP_056304140
LinkDB
All DBs
Position
22:complement(30173690..30197878)
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AA seq
320 aa
AA seq
DB search
MVSVMNTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENSTWDKMYEYTGHDSSVNSVCWGPYDFGLIL
ACGSSDGAISVLTCSGDGHWDIKKINNAHTIGCNAVSWAPAVVPGSLIEQPTGQKPNYIK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPAGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVDGQWACIS
DVNKGQGAVSSITDSQQSEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtttcggtcatgaacacagtggacacctcccacgaggacatgatccatgatgctcag
atggattattacggcaccagactggccacctgctcctctgatcgctccgtcaagatcttc
gacgtcaagaacggaggacagattcttgtggctgatttaagaggtcatgagggtccggtg
tggcaggtggcctgggctcatcccatgtacggcaacatcctggcatcctgctcctatgac
aggaaggtgatcatctggaaagaggagaacagcacctgggacaaaatgtatgaatacaca
ggccacgactcctccgtcaattcggtttgctggggcccttacgacttcggcctgattctg
gcctgcggcagctcagatggggccatctcagtgttgacctgctctggagacggacactgg
gatattaagaagatcaataacgcacatactatcggctgtaatgcagtgagctgggcccca
gctgttgtcccagggagtcttattgagcagccaacaggacagaagcccaactacatcaag
agatttgtgtctggaggctgtgacaatctggtcaagctgtggaaggaagaagacggccag
tggaaagaggaccagaagctggaggcgcacagtgattgggtgagagatgttggatgggct
ccttctattggtctgccgaccagcacaatcgccagctgctcacaggatggtcgcgtgttc
atctggacgtgtgatgacccggctggtaacacctggacggccaagctcctccacaaattc
aatgatgtggtgtggcacgtgagctggtccatcactggaaacatcctggctgtgtctgga
ggagacaacaaggtgaccctgtggaaggagtcagtggatggacagtgggcttgtattagt
gacgtcaacaaaggccagggggccgtgagctccatcacagacagccaacagagcgagcag
tga
DBGET
integrated database retrieval system