Danio aesculapii (panther danio): 130217548
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Entry
130217548 CDS
T11734
Symbol
sars1
Name
(RefSeq) serine--tRNA ligase, cytoplasmic isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
daes Danio aesculapii (panther danio)
Pathway
daes00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130217548 (sars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
daes01007
]
130217548 (sars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
daes03016
]
130217548 (sars1)
Enzymes [BR:
daes01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
130217548 (sars1)
Amino acid related enzymes [BR:
daes01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
130217548 (sars1)
Transfer RNA biogenesis [BR:
daes03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130217548 (sars1)
Prokaryotic type
130217548 (sars1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NOD
Motif
Other DBs
NCBI-GeneID:
130217548
NCBI-ProteinID:
XP_056305635
LinkDB
All DBs
Position
23:complement(14172728..14185891)
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AA seq
547 aa
AA seq
DB search
MVLDLDLFRTDKGGDPEIVRETQRKRFKDVSLVDKLVQADTEWRKCRFTADNLNKAKNLC
SKSIGEKMKKKEPVGDDETLPEEAQNLEALTAETLSPLTVTQIKKVRVLVDEAVQKTDSD
RLKLEAERFEYLREIGNLLHPSVPISNDEDADNKVERTWGDCTGQKKYSHVDLVVMVDGY
EGEKGAIVAGSRGYFLKGPLVFLEQALINYALRILYSKNYNLLYTPFFMRKEVMQEVAQL
SQFDEELYKVIGKGSEKSDDNTVDEKYLIATSEQPIAAFLRDEWLKPEELPIRYAGLSTC
FRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWEMFDEMIGTAESFYQTLGIPYR
IVNIVSGALNHAASKKLDLEAWFPGSQAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKV
PLCSECRSGGYYTFMVSGWFDCCICFFFLLQAEFVHMLNATMCATTRVICAILENFQTEE
GIIVPEPLKAFMPPGLTEIIKFVKPAPIDQETTKKQKKQQEGGKKKKHQGGDADLENKVE
NMSVNDS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttgatttagacctgtttcgcaccgacaaaggcggtgatcctgaaatcgtccgg
gaaacccagaggaaacgtttcaaagatgtgtctctggtggataaactggtccaggcggac
acagaatggagaaaatgtcgcttcacagccgataaccttaacaaggccaagaatctctgc
agcaaatccatcggtgaaaagatgaagaagaaagagccagttggggatgatgaaactctt
ccagaggaggctcaaaatctggaagcccttactgcagaaacgttatcgccactcactgtg
acccagataaagaaggtgcgggtcctggtggacgaggctgtgcagaagacagacagtgac
cggctgaagctggaggcagagcgctttgagtacctgcgagagatcggcaacctcctgcat
ccctctgtgcccatcagcaatgatgaggatgctgataataaggtggagcgcacctggggt
gactgcacggggcagaagaaatactctcatgtggatctggtcgtcatggttgatggatac
gagggggaaaaaggagccatcgttgctggaagcagaggatactttctcaaggggccttta
gtgttcttggagcaagctttaattaactatgcgctgcggatcctgtacagcaagaactac
aacctcctgtacacacccttcttcatgaggaaagaggtcatgcaggaggtcgctcagctc
agccagtttgacgaggagctctacaaggtgatcgggaaaggaagtgagaagtctgatgat
aatacagtggatgagaagtacttgattgccacatcagagcagccaatcgcagccttcctg
agagatgagtggctgaaaccagaagaacttcctatccgctacgctggcctctccacctgc
ttcagacaggaagtgggctctcatggcagagacacgcgtgggatcttcagggtccatcag
tttgagaagattgagcagtttgtgtacgcctctcctcatgatggcaaatcctgggagatg
ttcgatgaaatgattggaacagctgaatccttttatcaaacattaggaattccttatcga
attgtcaacatcgtgtcaggtgctttgaaccatgcagctagtaaaaagctggatttagag
gcttggtttcctggttctcaggcttttagagagcttgtgtcatgctcaaactgcacagac
taccaggctcgccgcttgcggattcgatacgggcagactaagaaaatgatggacaaggta
cctctctgttctgagtgtagaagtggtggatactatacgtttatggtttcaggttggttt
gactgttgtatctgttttttttttttattacaggctgagtttgtgcacatgctcaatgcc
accatgtgtgcgaccactcgcgtcatatgtgccatcctggagaacttccaaacagaggaa
ggcatcattgttccagaacccctcaaggcattcatgcctccaggtttaacagaaataatc
aagtttgtgaagccagcccccattgaccaggaaacaacaaagaagcagaagaaacagcag
gagggaggaaagaagaagaaacatcagggcggcgatgctgatctagagaacaaagtggaa
aacatgtcagtcaatgactcttag
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