Danio aesculapii (panther danio): 130218355
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Entry
130218355 CDS
T11734
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
daes Danio aesculapii (panther danio)
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
daes04121
]
130218355 (rnf6)
Enzymes [BR:
daes01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130218355 (rnf6)
Ubiquitin system [BR:
daes04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130218355 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_4
zf-RING-like
zf-P11
FAR1_N
Motif
Other DBs
NCBI-GeneID:
130218355
NCBI-ProteinID:
XP_056306514
LinkDB
All DBs
Position
24:complement(20553415..20561168)
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AA seq
700 aa
AA seq
DB search
MDPPGGRDERHRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQRLD
GAKERVSSQPRPEPRPQSSEAEGSSAAVEPGAETSNGDSLLEWLNTFRRTGNATRSGQSG
NQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDTPDPTDLPMPPPPPPPPPPPPPP
PPPVQSASPPTTPYNPSRAAPYSLQHPTPYSTSRPTLGRRAAVRRTRSSTTPPVTPPVIS
QAPPTPLRRNLPTLPSSPPPQVPLAFQSQEQDGGAVRSQIQVTTSSVNTGEEQNGSEGPD
CPNVQPQSDPQVAPAAREPRNSRTRSRGRVRRAAGAGGALSRSSRRSRSPLDRNPASSVS
PTHSSSSSTPPVESTGSTAVSMEMGQSAAEPTAPTDPPEAGEEEGETPVSGAGGVRRHPT
IMLDLQVRRIRPGENRDRDSIASRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRTY
VSTIRIPLRRISETGLGEPSSMALRSILRQIMTGFGELSSLMETEADSETATPSQDSAPA
AGAQTYRAVGAEGGATHGGVESARETLGEGEEEGQVRVSRTGPEGRPSSRDTNNLVENGT
LPILRLAHFFLLNEDEDEEHPRGLTKEQIDNLVTRTYGQVNLEGEQGRACSVCINEYAQG
NKLRRLPCTHEFHIHCIDRWLSENNTCPICRQPILSSHQE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcccggcggccgagacgagcgtcatcgtcaagcggagcggcttcggcgggag
gaggcatactatcacttcattaatgaactgagtgaggaggagtacagactaatgagagac
agcaatctactgggaacacctggtgaagtcacagcagaagagctgaggcaacgtctggat
ggtgcaaaggagcgagtgtcatctcagccacgccctgaaccacgcccacagagcagtgag
gcagagggcagtagtgctgcggtcgagccaggtgccgagacatctaatggagactccctg
ctggagtggttgaacacattccggcgcacaggaaatgccacacgtagcgggcagagcgga
aaccaaacttggcgtgccgtcagccgcaccaaccccaacagcggcgagttccgcttcagt
ttggagattaacatcaaccatgagcagcctgagcctggtgaacacagcgacactcctgac
ccaactgatctcccaatgcctccccctcctcctccccctcctcctcctccccctcctcct
cctcctccagtgcaatctgcctctccacccacaaccccttacaacccttcaagggctgca
ccttactcacttcaacaccccacgccgtactccacgagcagacccaccctaggaagaaga
gccgcagtgcgccgcactcgcagtagcaccactccacctgtaacgccccctgtgatctca
caggctcctcccacacctctgaggaggaacttgcctacattgccaagctctccacctcca
caggttccacttgcttttcagtcacaggagcaggatggtggtgctgttcggagtcaaata
caggtcacaacctcctcagttaatacaggagaggagcagaatggaagtgaaggcccagac
tgccctaacgttcagcctcagtctgacccccaggtggcgccagctgcccgcgagccacga
aacagtaggactcgttcacgtggtcgtgtgcgccgggcagcgggtgcaggaggggcttta
tctcgttcttcgagacgaagccgctcacctctggacagaaaccccgcctccagtgttagt
cccacccacagcagcagcagcagcacccccccagtagagtccaccggaagtacagctgtt
agcatggagatgggccaatctgccgcagagccaactgctcccacagatcctccagaggca
ggtgaggaagagggagagacgcctgtatcaggtgccggaggtgttcgtcgtcaccctaca
atcatgctggacctgcaagtgcggcgcatcaggccaggagagaaccgggacagggacagc
attgccagccgcacgcgctctcgtgctcgggccgctgaaaacacagtaaccttcgagagt
gacagtggtggcttccggagaacaatctcacgctcagagcgtgcgggaattcgcacttac
gtcagcactatacgcatcccattgcgccgcatttctgagacgggccttggcgagcccagc
tccatggcattgcgatctatccttcgccagatcatgaccggctttggtgagctcagctcc
ctcatggagacggaagcagattcagagactgcgacgcccagccaggactctgctcctgct
gctggagcccagacatatcgtgctgttggtgcagagggtggagccacccacggcggagtt
gaatcagcacgggaaactttaggggagggcgaggaggaaggacaagtgcgggtgagcagg
actgggccggagggacgacctagcagcagagacactaacaacctagtggaaaacggcaca
ttgcccattctaaggcttgcacacttttttcttctcaatgaagatgaagacgaggagcac
ccacggggcctcaccaaagaacagatcgacaatctggtcacacgcacttacggtcaggtc
aacctggagggtgagcagggccgcgcttgcagcgtttgcatcaatgagtacgcgcagggc
aacaagctgcgccgcttaccctgcacccacgagttccacatccactgcatcgaccgctgg
ctctctgaaaacaacacctgccccatctgcaggcagcccatcctgtccagccatcaggaa
tga
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