KEGG   Danio aesculapii (panther danio): 130220924
Entry
130220924         CDS       T11734                                 
Symbol
atxn2l
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin-2
Organism
daes  Danio aesculapii (panther danio)
Brite
KEGG Orthology (KO) [BR:daes00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:daes03019]
    130220924 (atxn2l)
Messenger RNA biogenesis [BR:daes03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     130220924 (atxn2l)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 130220924
NCBI-ProteinID: XP_056309169
LinkDB
Position
3:13804547..13841811
AA seq 1003 aa
MSFRRQNQPGPGGRKTSNGTSGSMASSVPGSNSNRPNPGRNRNSVKTPSQSPPVFEGVYN
NSRMLHFLTAVVGSRCDVMVKNGSLYEGIFKTLSSRCELAVDAVHKVKNEEGDGGGGGGT
AVHPRKEEITDTMIFGPSDLVTMICRDVDLNYATRDTFTDSAIGSSRLNGDHREKVLQRW
DGGDSNGENFDLDAETANGWDASEMFRFNEETYGVKSTYDSSLSMYTVPLERGSSEGFRQ
REARAARLANEIEASSQYRHRVALENDEGRTDEDKFSAVVRDRDREAAEKERGRDSPGFS
SAGSREGKYIPLPQRAREREMGVTGRGDRGGAVSTLPNRTNRPGPSSSSPRPLPSASSQA
LPPTDRNSSLSVRGGFSAHQSQSSPPTQPRPSEPGHSSPPSPHTLSHSLSHPQSLSDVAR
PVNGVSPKSQRTGQTNRNMRTSNSHSSPTVSRSPKPDAPPQDPLLTGSYLDTSSKPIGPT
PLFTVDVNEILSKERMESPASPQEGKSSKVPSVQQRTQIEELRKFGTTFRLQQSSNPKTL
APESPQANPAHNTQTDPAPPTEAKPATPTTPNTELSAEERSRETNSGGAATSTPPPATSI
SAPSGIGMQNPPAEGQTAGVPQPARTPGSEDGKPEALERSEGMTDQVKKSTLNPNAKEFN
PTKAPLSMVKPSATPTPPRPTPPSPTVVLQTQPGQGAIYNPQYLSYVSQVPIQMQPQIPY
PYSMTTVNQGKYARTKGSVVTPRPDHSSSAPPMLQAAASAAGPPLVASPYPPSYLQYNQV
IPAMPHYPGHQVYSMLQSGPRMLGSGGHPQALGPPGPQYPGQTEGPSAPQQGMYAPQSFS
HHSGSIHPQPSSTPTGSQPPPQHPAPSPGQSGQSGPQPQSLYHSGPLSAPTPPNLPPGHS
SPQASYSLQSYSIQGHPPLPHPYSSLGQLTQAHVSGALSGPHHTGGHGPPPVMLLHAAPQ
QGSGPQHGPPPQQGAHQHFTYLGPQVPVQAHNPQQIPYHPSGN
NT seq 3012 nt   +upstreamnt  +downstreamnt
atgtcttttcgccgacagaaccaacctggacccggtggccgcaaaacatccaatggaact
tcagggtcaatggcttcatccgttccggggagcaactctaacagacccaacccggggaga
aacagaaactccgtgaagactccttcacagtcaccacctgtgtttgaaggtgtgtacaac
aactcccggatgctccattttctcacagccgtcgtgggctccagatgtgatgttatggtg
aagaacggaagcttgtatgagggaatctttaagacgttaagctcacgttgtgagctggca
gttgatgctgtgcacaaggtgaagaatgaggaaggagatggaggcggtggaggcggcaca
gctgtccatcccaggaaagaagagatcacagacaccatgatctttggccctagtgacctt
gtcactatgatctgcagagacgtagacctcaactacgctacccgagacactttcacagac
tctgcaattggctcatcaagattaaacggtgaccacagagagaaggtcctccagaggtgg
gatggaggcgacagcaatggagagaactttgacttggatgcagagacggctaatggctgg
gatgccagtgagatgttccgctttaatgaggagacctatggggtgaagtccacctatgac
tccagtctctccatgtacacggttcctctggagcggggcagctctgagggcttcaggcag
cgagaagctcgtgctgcccgattggccaacgagatcgaggctagttcacagtatcgccac
agagtggcgctggagaatgacgagggaagaactgatgaagacaaattcagtgcagtggtt
cgagaccgggaccgtgaagcagcagaaaaagaaaggggaagagatagccctgggttctcc
agtgctgggagcagggagggcaaatacattcctctaccccagagagcaagggagcgcgag
atgggagtgactggcaggggtgacagaggtggagccgtgtccaccctgcccaatcgaaca
aatcgacccggaccatcaagctcctcccctagacccctcccctctgctagcagccaggcc
cttcctcccactgacaggaacagctctctgtcagtcagaggaggattctctgcacaccaa
tcacagagcagcccacctacacagccccggccctcagagccaggtcactccagtcctcct
tccccacacacactctcacattcactctcacaccctcagtctctctcagacgtggcccgg
cctgtcaatggagtttcacccaagtctcaaaggactgggcagactaacagaaacatgcgt
acctcaaactcccactcctcccctacagtctctcgttcccctaagccagatgctcctcct
caggaccctcttctgactggatcttatttggacacttcatccaaacccattggccccact
cctctgttcactgtagatgtaaatgaaatcctgtccaaggaaaggatggagagtccagct
agtccgcaggagggcaagagcagcaaagtcccttcagtccagcagagaacacaaatcgag
gagcttcgcaagtttggaactacttttaggctacagcaaagctccaaccccaaaacattg
gcccctgaatctcctcaagcaaaccccgcccacaacacacagacagaccccgcccctcct
acagaagcaaaacctgccacgcccacaaccccaaacacagagctttctgcggaggagcga
agtagagagactaattcagggggggcagcgacctccacccctcctccggccacatccatc
tctgcaccgtctgggattggcatgcaaaatccacctgcagaagggcagacggcgggggtg
ccccaacctgcaaggaccccaggcagtgaggatggcaaaccagaggcccttgagagatct
gagggcatgaccgatcaggtgaagaaatccacactcaaccccaacgccaaagaattcaac
cccaccaaggctcctcttagcatggtgaagccatcggcgactcccacaccaccacgacca
accccacccagccctacagtcgtgctgcagacccaaccaggccagggagccatttataac
ccccagtacctgagctacgtctcccaagtacccatccagatgcagcctcagatcccatat
ccatattccatgacaacagttaatcaagggaagtacgcaagaacaaaaggttctgtggtg
actcctcgtccagaccacagctcttcagcgccccctatgctccaggccgcagcatcagca
gcaggacctcctctggtggcgtctccttaccctccctcatatctgcagtataaccaggtc
atcccagcaatgccccactaccctgggcaccaggtgtactcgatgctccagagtggaccg
cggatgcttggatcaggagggcacccacaggctctgggacctccaggcccccagtatcca
ggtcagactgaaggtccatctgcccctcaacaggggatgtatgctccgcagtcattctct
catcactcgggctccattcatcctcagccctccagcacgcccacaggcagccagccaccc
cctcaacaccccgctcccagcccgggacagtctggtcagtctggtcctcagcctcagtct
ttgtatcactctgggccgctgtcagccccaacccccccaaaccttcctccaggacacagc
tctccacaggcctcctactcccttcagagctacagtatacaaggacacccaccgctgccg
cacccttactcctctctgggacagctcacacaggctcatgtttccggtgctctgtcgggt
cctcatcacacaggaggccacggtcctccgccagtgatgctgcttcatgctgcccctcag
cagggttctggccctcaacacggcccgccaccacagcagggggcccaccagcacttcacc
tacctaggacctcaggtgccagtgcaggctcacaatccccagcagattccatatcaccct
tctggaaactga

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