Danio aesculapii (panther danio): 130223002
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Entry
130223002 CDS
T11734
Symbol
rint1
Name
(RefSeq) RAD50-interacting protein 1
KO
K20474
RAD50-interacting protein 1
Organism
daes Danio aesculapii (panther danio)
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
daes04131
]
130223002 (rint1)
Membrane trafficking [BR:
daes04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
130223002 (rint1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RINT1_TIP1
Rab5-bind
Motif
Other DBs
NCBI-GeneID:
130223002
NCBI-ProteinID:
XP_056311626
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Position
4:40770675..40783956
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AA seq
779 aa
AA seq
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MAAPMMEHNNHSNMNLSELKLADSTKSDSPSEDGNLADDIVVLVLREIGGDLKSLKKVSG
LLEKLTLENKQLEEQVQTVSSSGPLRVSAALHAAEESQKKLESLLDKERLLSNKLQQHLQ
GAQVWTDSIGQVLGQLDTLERHMKYLQCLARIEELSDSIQQYLMTNSVWDAVRAIDSMAS
LDMDLRESGCLHLQAFLRETLRFWHKILKDKLTSDFEEVLTQLHWPFISAPTQTLSPPAN
AQELSSQLELLVSQLLSLQTSDDLISENKETSARPGQSQTPPLSLPIQIMLLPLSKRFRY
HFTGNRQTNNLSKPEWYLTQILIWMGNNSNFMEEKIQPILDRAGGNVNARVELCRGLLTL
AQEKLAHDAPRLLYDDALFCHLVDEILQFEKELRSTHSYPRAYPGVLHILLEESVFQKWL
SVERKMAVEKVDTMLSAEGAWSSQYKDITDMDELKAPDCAETFMTLLLVITERYRSLPCQ
RAQLSFLALQKELVDDFRIRLTQVMKEESRQPLSSRYCAILNAANYISTVLSDWGDNVFF
LQLQQAAVSVGEEILGPLGATESGRLASLEGSLFEELLALLERLRGDMLGRLLDAVMRDV
KEKAQPYCKDRWISLPSQSDQATMSLSSSACPMMLCLRDHLLQLQQMLCLPLFQMFWQGL
AERLDCFIYEDLILYNHFNEGGAAQLQYDMTRNLFPLFGHYCKRPENFFKHVKEACIILT
LKVGPALLLCDVLKQSEEDLPNHQQSSPESALNELGIYKLAPSDVQILLNLRSAWLNQS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcctatgatggagcacaacaaccacagtaacatgaatctttctgaactgaaa
ctagcagacagcactaaatctgactctccttcagaggatggaaaccttgcagacgatata
gttgttctcgtgctgagagagatcggtggagatctgaagtcgctaaagaaggtgtctggg
cttttggagaaactgacattagaaaacaagcagctagaagagcaggtgcagacggtgtcg
tcttcagggccgctgcgtgtatcagcagctttgcatgcagcagaggagtctcagaagaag
ctggagtcgctactggacaaggaaaggctgttgtccaacaaactgcagcagcatttgcag
ggcgcacaggtctggactgacagcatcgggcaggtcctggggcagctggacacattagag
agacatatgaagtacctgcaatgcctggcacgtatagaagagctcagtgacagtatccag
cagtatctgatgaccaatagcgtgtgggatgcggtcagagccattgacagtatggcgtct
ctggatatggatttgagggagtcaggctgtctccacctgcaggctttcctcagagagaca
cttcggttttggcacaagatccttaaagacaaactgaccagtgattttgaggaagtcctg
acgcagttacactggccgttcatctcagccccgacacagactctctctcctccagcaaat
gcacaggagctcagcagccagctggagctgctcgtctcccagcttctgtctctgcagaca
tctgatgaccttatatcagagaataaagagacatcagctcgtcctggacagtcccagact
cctccactctcactgcccattcagatcatgctgcttcctcttagtaaaaggttcaggtat
cacttcaccggaaaccgtcagaccaacaacttaagcaagccagagtggtatttgactcag
atcctcatttggatgggaaacaactccaactttatggaagagaagattcaacctatattg
gatcgtgctggaggcaatgttaacgcaagggtggaactctgtagaggtctgctgactctg
gcacaggaaaagcttgcacacgatgctcctcgattactctacgatgatgctctcttctgc
catctagtggatgagatactgcagttcgaaaaagagttgcgcagcacccacagttaccca
cgtgcctaccccggcgtcctgcacatactgctggaggagagcgtgtttcagaagtggctc
agtgtggagagaaagatggctgttgagaaagtggacaccatgctgtctgcagaaggagcc
tggagctctcaatacaaagacattactgatatggatgagctcaaagcaccagactgtgca
gagaccttcatgacccttctactggtcatcacagaacgataccgctctctgccgtgtcag
cgggctcagctcagtttcctggctttgcagaaggagctggtggatgattttcgcatccgc
ctcacgcaggtcatgaaagaagagtcccgacagccactgagctcccgttactgcgccatc
ctcaacgctgccaactacatctccactgttctcagtgactggggtgacaatgttttcttc
ttgcagttgcagcaggctgcagtgtcagtgggcgaggagatcctgggccctttaggggcc
acagagagcggcagactagcctctctggagggatctttgtttgaggaactgttggctctg
ttggagaggctgcgaggagacatgctgggccgattactagacgcagtcatgagagacgtc
aaggagaaggcacagccatactgcaaagacagatggatctctttgccatcgcaaagcgac
caggccactatgtcgttatccagttctgcatgtcccatgatgctttgcctgcgggatcac
ctgctccaactgcagcagatgttgtgtcttcctctgtttcagatgttctggcagggcctc
gctgagagactcgactgcttcatctatgaggatctcatcctttataaccacttcaatgaa
ggcggtgctgcacagcttcaatatgacatgaccagaaacctctttcctctgtttggacac
tactgcaagagaccagaaaacttcttcaaacatgtgaaggaggcctgcatcatcttgact
ctaaaagtgggtccagcgctgttgctgtgtgatgttctaaagcagtcagaagaagatctt
cccaaccatcagcagtccagtccagaatcagcactcaacgagctgggaatctacaaactg
gccccgagtgacgtgcagatcctcctgaacctccgctcagcctggctcaatcaatcataa
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