Danio aesculapii (panther danio): 130223103
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Entry
130223103 CDS
T11734
Symbol
tnpo3
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
daes Danio aesculapii (panther danio)
Pathway
daes03013
Nucleocytoplasmic transport
daes03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130223103 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130223103 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
daes03016
]
130223103 (tnpo3)
Transfer RNA biogenesis [BR:
daes03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
130223103 (tnpo3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
KAP122_middle
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
130223103
NCBI-ProteinID:
XP_056311783
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All DBs
Position
4:complement(45757214..45778835)
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AA seq
923 aa
AA seq
DB search
MEGGKPSLPLVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEISDQLLQLKQDIESC
YFAAQTMKMKIQTSFYELPPDTHTALRDSLLSHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYSNDVSSMTFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSTTV
VTLLVTCAEKSGHNEKMLIKVFRCLGSWFNLGVLDNNFMANNQLLMILFQVLQRDETSTN
LHEAASDCVCSALYAIENVAIHLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLEMTVRTPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKINDPA
LHNVFRPYIQRLLHSLARHCQLDPDHEGVPEDTDDFGEFRMRVSDLVKDVIFLVGSMECF
AQLYSTLREGNPPWEVTEAVLFIMASIAKNVDPENNPTLMEVLEQIVLLPETVHLAVRYT
SIELVGEMSEVIDRNPSMLDTVLNFLMKGLREKPLASAAAKAIHNICSVCRDHMAQHFQG
LLDIARSLDSFALSTDAAVGLLKGTALVLARLPLEKIAECLNDLCAVQVMALKKLLAQDS
SSGKSSDPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNAHQSDNRIVE
RCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQLYPHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFVQRSPVTLLSSNIIVHIIQCA
IAATTLDHRDANCSVMKFIRDLIHTGVTNDHEDDFEVRKRLIGQAMEQHGQQLVNQLINT
CCFCLPPYTLPDVAEVLWEIMVFDRPTFCRWLETTLKGLPKETAGGAVTVTHKQLTDFHK
QVTSAEECKQVCWAIREFTRLYR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgggaaaccctccctgccgctggtttaccaggccgtgcaggcgctatatcac
gacccggaccctgccggcaaggagcgcgcctcggtctggctaggagagctgcagagatcg
atgtacgcatgggaaatctccgatcagctcctgcagctgaaacaggacatcgagtcgtgt
tacttcgcagcccagacgatgaagatgaagatccagacgtcgttctacgagcttccccca
gatactcacactgcactgagagattcactattatctcacatccagaacctcaaagacctt
tctcccatcatcgtcacacaactcgcattggcaatcgctgatctggctcttcagatggcc
tcgtggaaaggctgcgttcacactctcatagaaaaatacagtaacgatgtatcctccatg
actttcctgattgagatactcacagttctgccggaagaggtacatagtcgctctctgagg
attggagccaacagacggacagagatcattgaggatctggcctattactctaccacagtg
gtcactctcctggtgacatgtgcggagaagtctgggcacaatgagaagatgctcatcaag
gtgttccgatgtttggggagctggtttaatttaggagtgctggacaacaatttcatggca
aacaatcaactgctgatgattctcttccaagtgctgcagagggatgagacatctacaaac
ctgcatgaggcagcatcagactgcgtgtgctcagcactgtatgcaatcgagaacgtggcc
attcacctgccgctggccatgcagctcttccagggagtccttactttagaaacagcctac
cacatggccgtagcccgagaagacctcgacaaggtgctaaattattgccgaatctttact
gaattgtgtgagacgtttttggagatgacggtaaggacaccaggacagggcatgggagat
ttacgcacgctagagttgctgcttatttgtgcaggacatccccagtatgaggtggttgag
atctcgtttaacttctggtatcgtctgggagagcatctttataaaatcaacgatccggca
ctccataatgttttcaggccatacattcagagactactgcacagtcttgcccgccactgc
caactcgacccagatcacgaaggagttccagaggacacagatgattttggagagtttagg
atgagagtatctgatcttgttaaagatgtgattttcttagttggctctatggagtgcttt
gcacagctgtattcaactctgagggagggaaaccccccatgggaagtaactgaagctgtt
ctgttcatcatggcttccatcgctaagaatgttgatcctgagaataatcccaccctaatg
gaggtgctggagcaaatagtgttgcttcctgagacggtccaccttgccgtccgctacacc
agtattgagctggtcggagagatgagcgaagtgatcgaccggaacccttccatgttagat
actgttttgaacttcctgatgaagggtttacgggaaaagccgttggcctctgcggcagct
aaagccatccacaacatctgctcggtgtgtcgagaccacatggcgcagcacttccagggc
ctgctggacatcgcccgctctctcgactccttcgccctgtcaacagacgccgccgttggc
ttgctcaaaggtacagcgctggttttggcccgtctcccgctggagaagattgcggagtgt
ctgaacgatctgtgcgccgttcaagtcatggcactgaagaagctgctggctcaggactct
agtagtgggaagtcgtcagatcctactgtatggctggacagactggctgttatcttcaga
cacacaaaccccatagtagagaatgggcagacacatccctgccagaaagtcattcaagag
atctggccggtgttgtcagagacgctgaacgcccatcagagtgataaccggatagtggag
cgctgctgtcgctgcctgcgatttgcagtgcgttgtgttggcaaaggctctgcttcttta
ctgcagccgctggttactcagatggtgagtgtgtaccagctgtaccctcactcgtgtttc
ctgtacctgggcagcattctggtagatgagtatggcatggaggaaggatgcagacaaggc
ctgttggatatgctacaggctctctgtatgccgacgttccagctgttagagcagcctaat
ggactgcgcaatcacccagacacagtggacgatctttttagactcgccacaaggtttgtc
cagcgcagtccagtcacgttgctgagcagcaatattatcgtccacatcatccagtgtgcc
atcgctgccaccaccctggaccaccgggatgccaactgcagcgtcatgaagttcatccga
gacctcattcacaccggcgtcaccaacgaccacgaggacgactttgaggtgcggaagcgt
ctgattggccaggcgatggagcagcacggccagcagctggtcaatcagctgatcaatacc
tgctgtttctgtctgccgccgtacactctgcctgatgtagccgaggtgctctgggagatt
atggtctttgatcgaccgacgttttgtcgctggctggaaaccacacttaagggtcttcct
aaagaaacagcagggggcgctgtcaccgtcacacacaaacagctcactgacttccacaag
caggtcacgagtgcagaggaatgtaaacaggtttgttgggccataagagagtttaccagg
ctgtaccgatag
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