Danio aesculapii (panther danio): 130223424
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Entry
130223424 CDS
T11734
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
daes Danio aesculapii (panther danio)
Pathway
daes03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130223424 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
daes03000
]
130223424 (arid2)
03021 Transcription machinery [BR:
daes03021
]
130223424 (arid2)
03036 Chromosome and associated proteins [BR:
daes03036
]
130223424 (arid2)
Transcription factors [BR:
daes03000
]
Eukaryotic type
Helix-turn-helix
ARID
130223424 (arid2)
Transcription machinery [BR:
daes03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130223424 (arid2)
Chromosome and associated proteins [BR:
daes03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
130223424 (arid2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
130223424
NCBI-ProteinID:
XP_056312224
LinkDB
All DBs
Position
4:58231062..58265260
Genome browser
AA seq
1570 aa
AA seq
DB search
MANSTGKNLPEQRRKGQAFLDELRQFHHSRGSPFKKVPVVGGKELDLGALYVRVVSLGGF
AKVSDKNQWVELVEDFQFPRSCSNAAFVLKQYYLRYLEKYEKVHHFGEEDEEEQPGNPKH
LLPIGAIPTSYNYQQHTVSDYLRQSYGLSMDFIPPSDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHAMQLEKEPKLVTLLLAHAGVFDDSLGSFSAVFGTDWQEKTSRDFVRFWKDV
IEDNEVKDLISDKSCTPQNGLELRDVCTPLFHPARNTGIGDVEGQRVLQVAMILRNLSFE
EANIKLLAANRTCLRFLLLCAHCTFIQLRQLGLDTLGNFAGELQLDPVDFRTTHLMFHTI
TKCLLSRDRFLKMRAMEILGNLSKVEDNGVLICEYVDQESYREIIALLTLPDVMLVISAL
EVLYQLAELGEITCSKISSVERSIDLLVRLVSVDLQTFGPDALTAVKLIEHQASSSQVSE
VRPQLVEHVPAASQGTPAAVNRTPVQSTPPPGIVEIDGEKFTTQWLNAHFEVHSDGSVSR
SEMYSEYLATCSKMARGGVLTSNNFYKCLRTLFPNHTVKRVEDTRLNGQAQIHVVGVRKR
AIPLPVQLYYQQQQQASPAPVPKHEAPSETPQAHSALPPGVGGQPVRAPAPSLTAGQAAP
QVAFTMHAPPHANAPSAPAPRPPFNPPGQAALPLCPPAAAPVPIRPNDILKTAMIQSSIP
TASTAPAVPNHSGSSTQQPLLHHAPVALIQQGPPPQGHVFTGQVHGVCASVAQQRPQAPS
QEAMVLAPPQYVTTPCTSLMAGGQVVTVAGVTGSRVAFQNIAPKPAHQVQSPQPPPTQPQ
SLVIVSPNQQPNTAFAPAIHQIVLTNPNPQQTPAPTSPNAAVPNPLSVQPHTVSQMLSVK
RQFQPTPPPAAAPAQPTSTESSLIKQLLLPKRGPSTPGGKLILPAPQVPAPVSTRAPSPQ
VVYQVTNSAPVPPQPQLNVQLMQSPGAVPISILPGQIISTSTSGTILQATPSNQVTFTVV
PNSGFPGQGVQTPPTIGLQLTQTPPLPVAGATPIPPFRGDKIICQKEEEAKDATGLHVHE
RKIEVMENNSIADASAKASNGETAEAEAPKLLNGRKFDSSLPPYHSGNSPSEAPNGPVAQ
SGCDGKQTPADPKKLMVNGVCDFERSDAASHPSKNIPNHKASKHMGNGEVLSPKAHGALG
LAEDTARAEPPERLANGPCHGADLSNGPSSETLSLRPQHAPHNHSPPPAAPDPPSANGTA
ESRTLKRPLEDGDRGTSAIPAKMGVRIVTISDPNNAGNSSTMVAVPAGADPSTVAKVAIE
NAAQQRPSVPSPLPETNAQQPVSVQTPPPVDPAAQGTNQSSPAPALSPEQTRKPGQNFKC
LWQACKRWFDTPSQVFYHAATLHGSKDSYPGQCQWEGCEPFPRQRLSFITHLQDKHCSRE
ALIAALKLEEQTQGSNPNTSKSPPAAVSSPPPPRPQKALVNHPSAALMALRRGSRNLVFR
DFTDDKEGPVTKHIRLTAALTLKNIAKYSDCGRKMVKRHENHLSVLALSSMEVSTTLAKC
LYELTRSLQA
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcgacggggaaaaacctccccgagcagcggaggaaaggacaggctttcctg
gacgagctgcggcaatttcaccacagcagaggatctccgtttaaaaaggttcccgtggtg
ggtgggaaggagctggacctgggcgctctctatgtgagagtggtgtctttagggggcttc
gcgaaggtgtccgacaagaaccagtgggtcgagctggtcgaggatttccaattccccagg
agttgctcgaatgctgcttttgttttgaaacagtactaccttcgctatttagagaagtac
gaaaaggtgcatcactttggagaggaagatgaagaggagcagccggggaaccctaaacat
ttgcttccgattggtgcaatacccacgtcatacaactaccagcaacacactgtatcagac
tatctccgccaaagctatgggctgtcgatggattttatccctccatccgattacaacaaa
ctggtgctgtccctcttgtctgggctcccgaatgaggtggacttcgccattaatgtgtgc
acgctgctgtccaacgagagcaagcacgccatgcagctagaaaaagagcccaaactcgtc
acactgctgctggcacacgccggagtattcgacgactcattaggcagcttttctgctgta
tttgggacggactggcaggagaaaacgtcacgagattttgtgaggttttggaaagatgtc
attgaggacaatgaagtcaaagatctcatctcagataagagctgcacaccccaaaacgga
ttggagctaagggacgtctgcactcctctcttccacccggctcgtaacacaggcattggg
gatgtggagggccagcgggtgctgcaggttgcgatgatcctgaggaatttgtcattcgag
gaggcaaacattaaactgctggcagctaatcgcacatgtctgcgcttcctcttactgtgc
gctcactgcaccttcatccagctgcggcagctcggcctcgacacactcggaaacttcgcc
ggagagcttcagttggatccggttgatttccgaacaacgcatctgatgtttcacaccatc
acaaaatgcttactgtcacgggatcgttttctcaaaatgagggccatggaaatcctggga
aacctgagcaaagtggaggataacggtgtgctgatctgtgagtatgtggatcaggagtca
taccgagaaatcattgctcttctgacgctgccggacgtcatgctggtcatctctgcgctg
gaggtcctgtatcagctggctgagctcggagagataacctgctccaaaatctcctccgtg
gagagaagcatagatcttttagtacggctggtctcggtggacctgcagacattcggaccg
gatgcgctgacagcagtgaaactgatcgagcatcaggcctccagctctcaggtgtccgaa
gttcgaccgcagctcgtggagcatgttcctgcagcttcgcaaggcactcctgctgctgtt
aacaggacacctgtgcagtctacgcctcctccagggatcgtggaaatagatggagagaaa
ttcacaactcagtggttaaatgctcattttgaggtccattcagatgggtcagtctcgcgc
tccgagatgtactcagaatatctggcaacctgcagcaagatggcacggggtggtgtgcta
acatccaacaacttctacaaatgcctgcggacgctgttccctaatcacacggtaaaacgt
gtggaggacacgcggctgaatgggcaggctcaaatccacgtggttggtgtgcggaagagg
gcgattcctcttcctgttcagctttattatcagcagcagcagcaggccagtcctgcacca
gttcccaaacatgaagccccctcagaaacccctcaggcccattcagcattgccccctggt
gtgggtgggcagcctgtccgggcaccagcaccaagccttactgccggccaggcagcacca
caggtggccttcaccatgcatgcaccgccgcacgctaacgctcctagtgctccagcgcca
cgaccccccttcaacccaccaggacaagccgcacttcccctgtgccctccagccgctgcc
ccagttcccatacgccccaatgacatcctcaaaacagccatgatccagagctccatcccc
acggcctccactgctcctgctgttcccaaccacagtggctcgtctacccagcagcccctg
ctccatcacgcccccgtcgcactgatccagcaggggccgccgccacagggacacgtattt
actggtcaagtgcatggagtttgtgcatcggtggcccagcagcgccctcaagccccttcc
caggaggccatggtgctggcgccgcctcagtatgtgaccacaccatgcacttcactgatg
gcaggaggccaggttgtaactgttgcaggcgtgactggctctcgtgttgcatttcagaac
attgcccccaaacctgcacatcaagtacagtcgccacaacctccgccaacacaaccacag
agcctagtcatcgtcagcccaaatcaacaacccaacactgcatttgcccctgccatccat
cagatcgttctcaccaaccccaatccacagcaaacgccggctcccacttctccgaatgcg
gcggtcccgaacccactgtcagtgcagccgcacaccgtcagccagatgctgtcagtgaag
cgtcagttccaacccaccccgccacccgctgctgccccagcccagcctacctccactgaa
tccagtctgatcaaacagctactgcttcccaaacgtggtccttccacccctggtggaaaa
ctcatcctccctgctccacaagtccccgctcctgttagcaccagagcgcccagtccgcag
gtcgtataccaggtgacgaacagcgctccggtgccacctcagccacagttaaacgttcag
cttatgcagagtcctggtgccgttcccatctccatcctccccggacagatcatctccacc
tccacctccggcaccatcctccaagccacccccagcaaccaagttaccttcacagtagtg
ccaaactctggctttccaggccagggagtgcagaccccacccacaatcggcctgcagctg
actcagactccgcctctgccagtagcaggagccacgcccatcccgcctttcagaggcgac
aaaatcatctgccaaaaggaagaggaagccaaggacgccacaggactgcacgtccacgag
cgcaagatcgaggtcatggagaacaactccatcgccgacgcttcggccaaagccagcaac
ggggaaacggcagaggcggaggcacccaagctgctcaacgggaggaaattcgactctagt
ctacctccataccactcagggaacagcccatcagaggcgcccaatggtcctgtagcgcag
agcggatgcgacgggaagcagacgcctgcggaccctaaaaagctgatggtgaacggagtg
tgtgactttgagcgatcggacgctgcttcccatccgagcaaaaacattccaaatcacaag
gcttccaaacacatggggaacggggaggtgctgtcgccgaaagctcacggtgcgctgggc
ctagcggaggacactgccagagcagagccgcctgaacgcctggccaacgggccctgccat
ggcgcagacctctctaatgggcccagctcagagactttaagcttgaggccacagcacgct
cctcataaccactcgccgcctccagccgctcccgacccgccgtccgctaacggcaccgcg
gagagccggacgctgaagagaccgctggaggacggggaccgaggtacctccgctatccct
gctaaaatgggtgtacggatagtgaccatcagtgaccctaacaatgccgggaacagctcc
accatggtggccgttccggcgggcgcagacccaagcacagtagcaaaagtagcaatagag
aacgcagcgcagcagagaccaagtgtgccctcgccgctgcctgaaaccaatgctcagcag
cctgtgtcagtgcagactccgcctcctgtggatccagctgcacagggaaccaatcagagt
tctccagcacctgccctctctccagagcaaacgcggaaacctggacagaactttaagtgt
ctgtggcaagcatgcaaacggtggtttgacacgccatcgcaggtgttttaccatgcagcg
acccttcatggcagcaaagactcgtacccagggcagtgccaatgggagggttgtgaacct
tttcctcgtcagagactatccttcatcacacacctacaggataagcactgctcgagggaa
gcactcatagctgcactcaaactggaggagcaaacgcaaggcagcaaccccaacacttcc
aagtctcctccagcggcagtcagcagtcctcctcctcccagaccccagaaagcactcgtc
aaccaccccagtgcagctctgatggcgttacgcaggggctccaggaacctcgtgttcagg
gacttcacagacgataaagagggaccagtgaccaaacacattagactaactgctgcctta
acgttaaagaacatcgccaagtactcggattgtggacggaagatggtgaagcggcatgag
aatcatctctctgtgctggcgctgagcagtatggaggtctccaccacgctcgctaaatgc
ctttacgaactcacgcgctctctgcaggcctga
DBGET
integrated database retrieval system
