Danio aesculapii (panther danio): 130228514
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Entry
130228514 CDS
T11734
Symbol
ungb
Name
(RefSeq) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
daes Danio aesculapii (panther danio)
Pathway
daes03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130228514 (ungb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daes03400
]
130228514 (ungb)
Enzymes [BR:
daes01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
130228514 (ungb)
DNA repair and recombination proteins [BR:
daes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
130228514 (ungb)
Prokaryotic type
130228514 (ungb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
130228514
NCBI-ProteinID:
XP_056312919
LinkDB
All DBs
Position
5:33262170..33266054
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AA seq
260 aa
AA seq
DB search
MSEEQANGENLQLSEEQLCQIEKNRRAALQRLASRNVPVPVGESWRRHIGTEFAKPYFTK
LMSFVTMERKCSTVYPSLEHMFYWTTLCTIEDVKVVILGQDPYHHPGQAHGLAFSVLRPK
SPPPSLENIFMELKEDIVGFQHPGHGDLTEWGKQGVLLLNSVLTVRAHQPTSHEGRGWEI
FTDAVVLWLSRNLRGLVFLLWGSYAQKKGRVIDRKHHHVLETSHPSPYSVHLGFSGCRHF
SKTNMLLKASGKKPVEWTAL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagagcaagctaacggtgagaacttgcagctcagtgaggagcagctgtgtcag
atagaaaagaacagacgtgctgcactgcaaagactggccagccgaaatgtacctgtgcct
gttggagaaagctggagaagacacattgggactgaatttgcaaaaccatattttacaaaa
ctcatgtcttttgttacaatggagaggaaatgctctactgtttatcccagccttgaacat
atgttttattggacaactttgtgcacaattgaagatgtaaaagttgtcattctcgggcaa
gacccctatcatcatccaggacaggcccatggtttggccttcagtgtgctgaggcctaaa
tcacctcctcccagtttggaaaacatattcatggagctaaaagaagatattgttggattc
cagcacccaggacatggagacctgacagaatggggtaaacaaggtgttctgctgctgaac
tctgtgctgacagtgagggctcatcaacccacctctcatgagggtcgaggctgggagatc
ttcacagatgctgtggtcctgtggctcagcaggaacctcagaggcctggtcttcctgctt
tggggttcatatgctcagaaaaaaggcagagtcattgacaggaaacatcatcatgttctt
gagacttcgcatccatcaccgtactctgtacatttaggcttttctggatgtaggcacttc
tctaaaactaatatgttactaaaagcatcaggaaagaagccagttgaatggacagctctc
tga
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