Danio aesculapii (panther danio): 130228680
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Entry
130228680 CDS
T11734
Symbol
spaw
Name
(RefSeq) southpaw
KO
K04666
nodal
Organism
daes Danio aesculapii (panther danio)
Pathway
daes04060
Cytokine-cytokine receptor interaction
daes04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130228680 (spaw)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130228680 (spaw)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
daes04052
]
130228680 (spaw)
Cytokines and neuropeptides [BR:
daes04052
]
Cytokines
Transforming growth factors (RSTK binding)
130228680 (spaw)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
CBM96
Motif
Other DBs
NCBI-GeneID:
130228680
NCBI-ProteinID:
XP_056313095
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Position
5:complement(70561931..70570207)
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AA seq
404 aa
AA seq
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MQSITARASFAFFLLRFVDCVWIDTNGAFIRDHRTAFFSAYSSQFYPRYPLYMMQLYRDF
SGNKMLTTPASVDNPALHQSDFVLSLIAQDCHQTEERWVVSFDMSSLSANDNIQLSELRI
RVPAFSAARRVTVDIFHQHKQHCASDSVFCRNKKQFLGSIKSVDGSQSSSSWRVFNITEL
LQQWLNQGTDTPDRVTAPDYDQGSGSGSGDDFIESLTSSWPKKIQHPTAERVMIVVFYKN
KVSQSASSLMNTVAQSKYVTLNRPPDAAQGRRHKRNRVERMRMTDDRNVTGKPTHSEEQQ
ASLCRRVDMWVDFDQIGWDEWIVHPKRYNAYRCEGECPSPLDETYNPTNHAYMQSLLKLY
QPERVSCPSCVPLRLSSLSMLYYEGDEVVMRHHEDMIVEECGCQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctataacagcgcgcgcttcattcgcgttttttcttttgcgctttgttgattgc
gtgtggatcgatactaatggcgcgttcattagagatcatcgtacagccttctttagtgct
tattccagccagttttatccaaggtaccccctgtacatgatgcagttatacagagacttc
agcgggaataagatgctgacaactcctgccagtgtggacaacccggctctccatcagtct
gacttcgtcctgagcttgattgcacaagactgtcatcaaactgaagagcgatgggtcgtc
tcttttgacatgtcttctctgtcagcaaacgacaacatccagctctctgagcttcgcatc
cgggtgccggcgttttctgcagccagacgcgtgactgtggacatcttccaccagcataaa
cagcactgtgcgtccgactcagtgttttgccgcaacaaaaaacagtttctaggcagcatc
aaatcagtggacggctctcaatcgtcatcatcctggagagtttttaacattacagaactc
ctacagcaatggctgaatcagggaacggatacaccagaccgggtcacggcaccagattat
gaccaaggcagtggaagtggaagcggagacgactttattgaatctctcacaagcagctgg
cccaaaaaaatccagcatcccacagcagaacgagtcatgattgtagttttctacaaaaat
aaagtctcccaaagcgcttccagcttgatgaatacagtggcgcagtccaaatacgtcacc
ctgaaccggccaccagacgcagctcagggtcggagacacaaacgaaaccgtgtggaaagg
atgcgcatgactgatgacagaaatgtgacaggaaagccaacacattcagaggaacagcag
gcatcactttgccggcgggttgatatgtgggtggattttgatcagatcgggtgggatgag
tggatcgtgcatcctaagcgttataatgcataccggtgcgaaggggaatgtccgagtcca
ctggatgagacttacaacccaacaaaccacgcttacatgcagagtctgctgaagctctac
cagccggagcgggtcagctgtccgtcctgcgtgccgctgcgcctcagctcgctctccatg
ctgtactatgaaggagacgaagtggtcatgagacaccacgaggacatgatcgtggaggag
tgcggctgtcagtga
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