Danio aesculapii (panther danio): 130228822
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Entry
130228822 CDS
T11734
Symbol
tnca
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
daes Danio aesculapii (panther danio)
Pathway
daes04510
Focal adhesion
daes04512
ECM-receptor interaction
daes04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130228822 (tnca)
04518 Integrin signaling
130228822 (tnca)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130228822 (tnca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
daes00536
]
130228822 (tnca)
Glycosaminoglycan binding proteins [BR:
daes00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130228822 (tnca)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_PBP1
Fn3_Dep-1_2nd
DUF7949
EGF
hEGF
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
130228822
NCBI-ProteinID:
XP_056313256
LinkDB
All DBs
Position
5:complement(6104571..6237865)
Genome browser
AA seq
2336 aa
AA seq
DB search
MSSRGLTISCLLLIALMTLNHAGLVKKLIRQRREALNIPGIHNVTLSNSSRPVIFNHVYN
IKVPGSPLCSVDLDAPEGSDVEQKDAPSEHSLDGGNQIVFTHRINIPKQACGCGDGLPDL
KDLLSRLEMLEGEVSSLREQCGAESTCCSAQVTGAIGTKPFCSGHGNYSTETCGCVCAPG
WKGLNCTIPDCPGDCSDQGRCVNGKCECFEGLTGDDCSIDACLIDCGDNGRCVNGKCVCN
EGFSGEYCTESDCLNNCLGRGRCVDSECVCDEPWTGFDCSELICPNDCYDRGRCENGTCY
CDRGFTGEDCGALACPNDCSGRGFCIDGRCICDAGYTGEDCSSLTCPNNCNDRGRCSNGV
CICEVGFHGEDCGRISCPSNCNNRGRCIDGRCECDVGFQGHDCSELSCPNNCNNRGRCVN
GQCVCDEGFGSEDCGLKTCPSDCYGRGQCIDGKCVCFANFAGEDCSELRCPNSCLNRGRC
IAGQCVCDEGFTGEDCSLRKCPNDCLGRGRCVDGRCVCRDGFKGQDCSVPTCPGNCNDRG
RCVNGKCVCNAGFFGDACSDRSCLNDCSAVGQCVDGRCICDEGYIGEDCSEVSPPEDLTV
TDVSTQRVNLTWRNEMLVTEYLITYVPTGPGGLQMDFRVAGDRTSATVSELEPGIEYLIN
VYAVLNNKRSIPVSARVATHLPQPEGLRFTSITDSTVEVVWEQLNFPFDGWELIFRNTKE
ENGKIVNNLTPSQTTFEQRGLGPGQEYEVTLSVIKNNTRGPETSSTVVTRIDSPAQIEVA
DVTDRSAVISWSRPVAPVDGFKVSYGPSTDPLIHRDVELTASDTQYSLEDLKPDTEYRVA
LSSQRGDVTSEPIIESFTTGLDAPSELRAVDQTDSSIMLEWKNSRSSIDGYRIKYGPIAG
GAHGEDMFPKKTGDTTWATITGLKPGTEYGIGVTAVQNERESEPATTNALTDLDPPRDLE
VQSSTETSVDLVWKRPRAKISTYRLAFVSVDGRREEIELPASASTSTLSGLMPGMSYTVT
LVAERGHRRSAPATVTASTASFTFYLANAFPEFGSAKGADDNIISFVSLENSETPFSGSE
LEDPIGGSFTISNVSSHGFDLMWDSNKLAGFDSFTVEVTDFSGMWKEEVHLNGKVNDTKI
RGLKSSTEYQVRLYGLSNNQRSSLLEAVAVTAPKSTSPDVVALTVKRVSTTQPSVSTSAL
LTEDFKAEDPLSDLKVTEVSPNSLRLSWRAPARAFNSFIIELNSTSNKSKDSIIKVSGEA
RHAHVEGLNADMNYEITLYGRKAGEKSQPISVFVKTEAQKPQIGSLSVSDVSWDSFNVSW
IIEDGPAFDSFVIEVANSAGPERQNLSVSGDARNLWMSGLSPGTSYMITMYGVHQGSILG
SVNVEAATDRAPAVGNLYVSNVTSQSFFISWNDTKGDIERFVLEIIDSSWQQEPVEYNLS
QSIQSYEITGLRPTTDYIAYLTGVIKGRRTDSVSAVASTAAEPDLSGLVVSNVTSDSLSL
SWRTGEKAFDNFIVEVRESALPTQATGRMFGAGVRSAVLNGLRGNTTYQIKLYATVAGAN
TDALTTVVTTEPKPELGRVVVSERQASSLTLSWSTLSGHFDGFAARVSDREQLYDVVELR
LSGTERNTSIQGLVDSTVYDIMFYGLSRGRQTPSIYFNTSTASLPKVENLTVWDVTPYGF
RVSWDADSGFSHFQVKVSDSGQLLEPQEVVVPGNEASLEVLGLITGIGYEVSVTGVSGTG
LRSRPITTVAVTEAEPEIEHLFVSDITPESFRLSWTAEDDVFDRFVLKVRDSRKLSHPRE
FSVSGDERTKVLTQLLGGTEYEIELYGVTLERRSQPVTAVVKTGLGALRDLHFSDITDKS
AVAYWTLPRAQPDSYRITCIPIQGGTPMIVQVDGSQSQVSLRNLIPGETYQVSVITVKGL
EESEPVSGTFTTALDTPRSLTVVNVTDSSALLFWQPAVATVDGYMITYSADTVPPISEQV
SGNTVEFEMNSLAPATQYTVSVYAIRDREKSLPATADFTTDVDAPRDLVASNIQTDSAVL
SWKPPRAAITGYTLTFQNSDGDVREVIVDPSVTSHALSDLRSTTKYTVLLQAVSEDKRSR
SISTEFTTVGMLYGNPRDCSEALLNGETSSGPYTIYVNGDEKQPLKVYCDMTTDGGGWML
FLRRQSGKLNFYRNWRNYSAGFGDTSDEFWLGLSNLHKITAAKQYEIRVDLRDGPETVFA
VYDRFYIGDPRSRYKIQIGAYSGTAGDSLTYHQNRPFSTYDSDNDIAITNCALSYKGAFW
YKNCHRVNLMGKYGDSSHSKGINWFHWKGHEHSIPFAEMKIRPANFRNLEGRRKRS
NT seq
7011 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagaggcctgacaatcagctgtttgcttttaatcgctttgatgactctaaat
cacgccggccttgtaaagaagctgatcagacagcgtcgggaagctctgaatattcccggc
atccacaatgttaccctttccaactcctccagaccagttattttcaaccatgtctacaat
attaaagtcccgggcagccctctgtgctctgtggatttggacgctcctgaaggatcagat
gtggagcagaaggatgcaccatctgagcacagtctggatggtggtaatcagatcgtcttc
acacaccgtattaacatccctaaacaggcgtgtggctgtggggacggcctgccagatttg
aaggatctcctaagtcggctggagatgttggagggtgaagtgtcctcattgagggaacag
tgcggtgctgagtcaacatgctgtagtgcacaggtcacaggtgcgataggaacgaagccc
ttctgcagcggacatggaaactacagcactgagacctgcggttgtgtctgtgctcctgga
tggaaaggccttaactgcaccattcccgactgtcctggagactgtagcgatcaaggccgt
tgcgttaatgggaagtgcgagtgtttcgaaggcttgaccggtgatgactgcagcattgat
gcctgtctgattgactgcggcgataatggccgttgcgttaacggaaagtgtgtttgcaat
gaagggttctccggggaatattgcacagagtcagattgccttaacaactgtttgggacgc
ggccgctgtgtggatagcgaatgtgtttgcgatgaaccctggactggatttgattgctct
gaactcatctgtccgaacgattgctacgatcgcggacgatgtgaaaacgggacttgttat
tgtgacagaggattcaccggagaagattgcggggctcttgcttgtccgaatgattgctcg
ggacgaggtttctgcatcgatggacgctgcatatgcgatgcaggatacaccggcgaggat
tgttcgagtttgacctgtccgaataattgcaacgatagggggcgctgttctaacggcgtg
tgcatttgtgaagtgggcttccacggagaggattgtgggagaatttcatgccctagcaat
tgcaataatcgaggtcgctgcattgatggacgttgcgaatgtgatgttggctttcaaggc
cacgattgttcggagctcagctgtcctaataattgcaataatcgtggacgttgcgttaac
ggtcagtgtgtttgcgatgaaggatttgggagcgaggattgcggtcttaaaacctgtcca
tcagactgctacggtcgaggtcagtgcattgatggaaagtgcgtttgttttgccaacttt
gccggtgaagattgcagtgaattgcgttgtcctaatagctgcctaaaccgcggacgttgc
atcgcaggacagtgtgtgtgcgatgaaggtttcactggcgaagattgcagtctgagaaag
tgccccaatgactgtcttggacgtggacgctgtgttgacggccggtgtgtctgtcgggac
ggttttaaaggccaggattgctctgttcccacttgtcctggaaactgcaatgatcgtggg
cgctgcgtcaatggaaagtgtgtgtgcaatgcgggattttttggagatgcctgcagtgac
agaagctgtctgaatgactgcagtgctgtgggacagtgtgtcgacggccgctgcatttgt
gatgaaggatacattggcgaggattgctcagaagtttctccaccggaggatctgactgtg
actgatgtgagcacgcagagagtgaacctgacgtggaggaatgagatgcttgtgacggag
tatctgatcacatatgtgccgacgggtccaggcggcctgcagatggacttcagggttgct
ggagatcgaacatccgccaccgtctctgaactggagccgggaattgagtatctgatcaac
gtctacgctgtcctcaacaacaagaggagcattcctgtcagtgccagagtagccacacat
ctccctcagcctgaaggcctacgctttacatctatcacagactcgacagtggaggtcgtg
tgggaacagctcaacttccctttcgatggctgggagctcatctttagaaacacgaaagaa
gaaaacgggaaaattgtgaacaacctgaccccttctcagactacctttgagcaacgggga
ctgggaccgggacaggaatatgaagttacattatcggtcataaagaacaacaccagagga
cctgaaaccagctccactgtagttacaagaattgattctccagctcaaatcgaagttgct
gatgtgactgaccgctcagcggtgatctcctggtccagacccgtggctccggtggatggg
tttaaggtttcgtacgggccgagcacagatcctttaatccaccgtgatgttgagctcact
gcctcagatacacagtacagcctggaagacctgaaaccagacactgaatacagagtcgcc
ctcagttcacagagaggagacgtgaccagtgaacccatcatagagagcttcaccaccggc
ctggatgctcccagtgagctcagagctgtggatcagactgacagcagcatcatgctggag
tggaaaaacagccgctcgtctattgatggataccgcatcaaatacggcccaatcgcagga
ggtgctcatggtgaagacatgttccctaaaaaaacgggagacaccacatgggccacaatt
acaggcttgaagcctggaacggagtatgggattggagtcacagccgtgcagaatgaaaga
gaaagtgaaccagcaaccacaaacgcactcactgacctggatcctccacgagacctggaa
gtacagagctccactgaaaccagcgtggatctggtctggaagaggccgagggcaaagatc
tccacctacaggctggcgtttgtgtctgtggacgggcgacgggaggaaatcgagctgcca
gccagcgccagcacctcaacactgagcggcctgatgcccggcatgagctacacagtgacc
ctggtggctgaacgcggacacagaagaagcgctcctgccaccgtcaccgcatccacagca
tctttcacattttatctagcgaacgcttttcctgagttcggttcagccaaaggcgccgac
gacaatatcattagctttgtctctctggagaactccgaaacaccattctctgggagcgaa
ttggaggatcccattggaggctcttttaccatatctaatgtctcgtcccatggatttgat
ctcatgtgggactcaaataaacttgcaggctttgatagtttcactgtagaagttacagat
ttctcagggatgtggaaggaggaggttcatctcaatggaaaggtgaatgacactaaaatc
cgtggcctaaaatcttccactgagtaccaagtaaggctttatggattatccaataaccaa
aggtcttcgctactagaagcagttgcagttacagcaccaaagtctacctctcctgatgtt
gttgctttgaccgtcaaaagagtttcaacaacgcagccatcagtctctacctccgctctt
ttaacagaggattttaaagcagaagatcctctcagtgacttaaaagttactgaagtgagc
ccaaatagtttgaggctctcctggcgggctccagcaagagccttcaatagcttcattatt
gagctgaactcgacgtcaaataaatctaaagacagcattattaaagtgtctggagaagcc
aggcacgctcacgtagaaggattaaatgctgatatgaattatgaaattacattgtatggg
aggaaagcaggagaaaaatctcaaccaatcagtgttttcgtcaagacagaagcgcagaag
ccccagattggcagtctgagtgtgtctgatgtatcttgggatagtttcaatgtgtcctgg
atcattgaggacggccctgcctttgacagttttgtgattgaagtggcaaattctgcaggt
cccgaaagacaaaacctttcagtatcgggcgatgcacgtaacttatggatgtctggactc
agtcccggcacgtcctatatgattacaatgtatggtgtgcatcagggctcgatcctgggc
tccgtcaacgttgaagcagctacagatagagctccagcggtgggcaatctgtatgtgtct
aatgtaacatcacagagcttcttcatttcatggaatgacacgaagggagatattgagcgc
tttgtcctggagattatagactccagctggcagcaggagccggttgagtataatctgtct
cagagcattcagtcgtatgagatcactgggctacggccgactactgactatatagcttac
ctcactggagtgataaagggaaggagaacagattcggtcagtgctgtcgcctccacagcg
gccgagcctgacttgtctggactagttgtttcaaacgtaacctcagactcattgtcgctc
tcctggcggacgggagagaaggcctttgataactttatagtggaggtcagagagtctgct
ttgcccacgcaggcgacggggcgaatgtttggggcaggtgttcgctccgcggtgctgaac
ggcctgagaggaaacaccacatatcagatcaagctgtacgccacggtcgctggtgccaac
actgatgccctcaccactgtagtgaccacagagcctaagcctgaactgggccgtgttgtt
gtgtctgagcggcaggccagtagcttgactctgtcctggagcacattgtcaggccacttt
gatggcttcgctgctcgagtctcagaccgagagcagctttatgatgttgtagagctcagg
ctgtcaggcacagagaggaacacgagcatccagggtctcgtggactccacggtctatgat
ataatgttttatggtctgtctcgtggccggcaaactccatcaatttacttcaataccagt
acagcgtcgttacctaaagtggaaaacctgaccgtttgggacgttaccccgtatggcttt
cgggtgtcctgggacgcagattcgggcttcagtcattttcaggtaaaggtgtcagactct
gggcagctgctggagccgcaggaggtggtagtgccggggaacgaggcctcgctggaggtt
ttgggcctgataactggcattggctatgaggtcagtgtgaccggggtgtctgggactggg
ttacgctctcgtcccatcaccacagtggctgttacagaggcagaaccagagattgagcat
cttttcgtgtcggacatcacacctgagagtttccggctgtcctggaccgcagaagacgat
gtctttgaccgatttgtgctcaaagttagagattccagaaagctatctcaccccagagaa
ttcagcgtgtcgggtgatgagagaaccaaagttttaacacagcttttggggggaacagag
tatgaaattgagctttacggcgtcacgttggaacggagatcacaacctgttactgcagtg
gtgaaaacaggcctcggagctctacgagatcttcatttctctgatatcacggacaagtca
gctgtggcttattggactttacctcgtgctcaacccgactcttacagaatcacctgcatc
ccaatacaaggaggaactcccatgattgtgcaggtggacggatcgcagtctcaggtttct
ctgaggaatctgatccctggagagacgtatcaggtgtctgttattacagtgaaaggccta
gaggagagcgaacccgtgtctggcacttttaccacagctctggatactccacgcagcctg
actgtggtcaatgtcacggactcgagtgcactgttgttctggcagcccgccgtggccact
gtggatggatatatgatcacatacagcgcagacacggtgccaccgatttcagagcaggtt
tcagggaacaccgtggagtttgagatgaactctctggctccagcaactcaatacacagtc
agtgtttacgccatcagagaccgagagaaaagtcttccagcgaccgcagacttcactaca
gatgtggatgctcctcgtgatctggtggccagtaacattcagacggacagtgctgtgctc
agctggaagcctccgcgggccgccatcactggatatacactgacctttcaaaactctgat
ggagacgtcagggaggtgattgtggacccgtctgtgacgtctcatgctctgtctgatctg
agaagcaccacaaaatatacagtccttctgcaggcagtgtctgaagacaagaggagcagg
agcatcagcaccgaattcactactgtgggaatgctctatggaaaccccagggattgttct
gaagctctgctgaatggagagacgtcatccggtccatacaccatttacgtaaacggagac
gagaagcagccgctcaaagtttattgtgacatgaccactgatggaggaggatggatgctg
ttcctgcgccgtcagagcggaaagctgaacttctacagaaactggaggaactactctgcg
ggatttggagacacgagcgacgaattctggcttggactgtcaaatctgcacaaaatcaca
gcagccaagcaatatgagatccgcgtggacctgcgtgacggacctgagaccgtgtttgct
gtctatgacagattttacatcggagatcctcgttcccgctacaagatccagatcggtgca
tacagtggaaccgcaggcgactctctgacgtatcaccagaacaggccgttctccacctat
gacagtgacaatgacatcgccatcaccaactgtgccctctcatacaaaggcgccttctgg
tataaaaactgccatcgagtcaatctgatgggcaaatatggagacagcagccacagcaag
ggcatcaattggtttcactggaaaggccacgaacattcaattccctttgcggagatgaag
atccgaccagcaaatttcagaaacttggaaggccgacggaaaagatcctaa
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integrated database retrieval system
