Danio aesculapii (panther danio): 130228963
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Entry
130228963 CDS
T11734
Symbol
poli
Name
(RefSeq) DNA polymerase iota isoform X1
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
daes Danio aesculapii (panther danio)
Pathway
daes03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
130228963 (poli)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daes03400
]
130228963 (poli)
Enzymes [BR:
daes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130228963 (poli)
DNA repair and recombination proteins [BR:
daes03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
130228963 (poli)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
UBM
IMS_HHH
HHH_5
Cdd1
DUF4332
Motif
Other DBs
NCBI-GeneID:
130228963
NCBI-ProteinID:
XP_056313459
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All DBs
Position
5:complement(19885722..19910612)
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AA seq
708 aa
AA seq
DB search
MDSDEEEDRNDWERSLELDILKTEGSSTDRVSLTSQRVILHFDLDCFYAQVEMIRNPALR
TKPLGIQQKYIIVTSNYVARELGVNKLMSVTDAVEKCPQLVLVKGEDLTHYREMSYKVTE
LLMSYCPLVERLGFDENFMDVTEMVEKRMKETHISDLSFNGHIYNHESVVVDEENVRLAV
GSVIAAEMRQAIFSTLGLTGCAGVASNKLLAKLVSGSFKPNQQTTLLPHSTAELMSSLTG
LIKVPGIGYKTREKLKALGLVSVKDLQSYPLSDLVKEFGEVNAKRIQNLACGIDDSPVTP
AGPPQSLSDEDSFKKMSTLEEVLKKIEELLINLTERMHKDGRQPHTLRLTIRKYTVTNRW
FNRESRQCPIPNHTGLKITGGSSEAVPQLLSLSMKLFHKMVDPHQPFHLTLLNVCFSNLQ
AKTSSKSSIASFFTHKSPSTTQITSQEVDSDLCESVATSHFTQADVWHKNDKTCKPVNNT
SISPTQTQPTSINPKSSISPRQPVSDHLQHTNINIRPPCLSNAPKKTSHFKLPANVDAEV
FKLLPEHIQMELMSSFKNGDSDYRPADTEDVDPEHRPTFASHHPKTPEACESAINDSTNS
ASNHHELSQKFSSPQSITEFSSGVVTESDDIPHSTQAIQPEVPANVDPYVFSQLPADVQR
ELLTEWRQQRPILKIPSKHSHKAFNSKERKTSTKGSQCNNILKYFKPN
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacgaagaggaagaccgtaatgactgggaacgcagtttagagttagacatt
ttgaagactgaaggaagttctactgatagagtttcattgacatcccagagagtgatcctg
cattttgacctggactgtttttacgcacaagttgagatgatccgaaatccagccctccgg
accaaacctcttgggatacagcagaaatatattattgtaaccagtaattatgtggcaaga
gagcttggcgtgaacaaactgatgtcagtgacagatgcagtggagaaatgcccacagctg
gtgcttgtaaaaggagaagatctcactcattacagagaaatgtcctacaaagtcactgaa
ttgctgatgtcgtactgccctctagtggagaggctgggctttgatgaaaacttcatggac
gttacagaaatggtggagaaacgaatgaaggagacccacatttcagatctctccttcaat
ggacacatatacaatcatgaaagtgttgtggttgatgaggagaatgttcgtctggctgtc
ggctctgtgattgctgctgagatgaggcaagccatcttcagcacgctgggactaactggc
tgtgctggtgtcgctagcaacaaactattagccaagctggtgtcgggcagctttaaaccc
aaccagcagaccaccctcctgcctcacagcaccgctgaactcatgagcagccttacagga
ctcatcaaagtgcctgggattggttacaagacacgtgagaagctgaaagctctgggtttg
gtcagtgtgaaggatctacagtcgtatcctctgtctgatctggtgaaagagtttggagaa
gtgaacgctaagagaatccaaaaccttgcctgtgggattgatgactctccagtgactcca
gcgggtcctcctcagtccctcagcgatgaggactctttcaagaaaatgtccactctagag
gaagttctgaagaaaattgaagaactgctcatcaaccttactgagaggatgcacaaagac
ggcaggcagccacacacactgagattaaccattcgcaaatacactgtcactaatcgctgg
tttaatcgagagagtcgtcagtgtcccattcccaaccacaccgggctcaagatcacagga
ggaagcagtgaggctgtaccccagttactgtcattgtcgatgaagctctttcacaaaatg
gtggacccacatcagccttttcatctgactctgctcaatgtgtgttttagcaacctgcaa
gctaaaacctccagcaaaagctccattgcttctttctttacacacaaatctccttcaaca
acacaaatcacatctcaggaggtggactctgatctctgtgaatctgttgcaacttcccat
ttcactcaagcagatgtttggcataaaaatgataaaacgtgtaaaccagtaaacaacaca
tcaatatctccaacccaaacacagccgacctcaatcaaccccaaatcttccatatctccc
agacagcctgtttcagatcacttgcaacatacaaacataaacatcagaccaccttgtttg
agcaacgctcccaaaaaaacatcacatttcaagctgcctgctaatgttgatgcggaagta
ttcaaactccttcctgaacacattcagatggagctgatgtctagttttaaaaatggagac
tccgattacagacccgccgacacagaagatgttgacccagaacatcgacccacatttgcc
tctcaccacccaaaaacaccagaagcttgtgagtctgcaataaatgacagcacaaattct
gcttctaatcaccatgaactcagccagaagttttcatcccctcagtctatcacagagttc
agttctggagtcgtcacagaaagtgacgatatcccacactcaactcaggccattcagcca
gaagttcctgcaaatgtggacccatatgtgttttcacaacttcctgctgatgtgcaaagg
gaattactgaccgagtggagacagcagaggccgatcctcaaaatcccttcaaaacactca
cataaagccttcaatagcaaagagaggaagacctcgactaaaggcagccagtgtaacaac
atactcaaatacttcaaacccaactga
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