Danio aesculapii (panther danio): 130229055
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Entry
130229055 CDS
T11734
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
daes Danio aesculapii (panther danio)
Pathway
daes04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130229055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
daes03000
]
130229055
03036 Chromosome and associated proteins [BR:
daes03036
]
130229055
Transcription factors [BR:
daes03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
130229055
Chromosome and associated proteins [BR:
daes03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
130229055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
130229055
NCBI-ProteinID:
XP_056313622
LinkDB
All DBs
Position
5:24297804..24340199
Genome browser
AA seq
1756 aa
AA seq
DB search
MSAEVLRPGPVAGGGSKLGELIGRLHEYLATSTEDKNGPALPGHWNGTTSREYLDEQARV
AEEAGGPSEVGMLSSRSRRKPTVVTKHSGMNESDVSSESGAEDVISVHSSDHDTNLLPKG
TVFVLPEPVCNETRDDFRGPEFRSRRIHKQHRDNADRRRGGYELERVNCSACGQQVNHFQ
RDSVYRHPMLKVLICKSCFKYYMSDDISKDSEGMDEQCRWCAEGGSLIGCDYCSNAFCKK
CVLRNLGRKELSTILEEERKWYCYVCSPEPLVELVLSCDSVLENLEQAQKRASRNEPNSV
RGRAKGGRGAADLLGPGGGPVPSAGLYQRMQRFVDVTTSLSHSFKAVVQSEKDDEGKLER
IGQLRMFRAVLDDLQAANRALQEALDHELTGSKRRDNKSRAKSRRRKAVLEQSSELTKEL
VVKLTPVPVSPKPISNTTTPIILPPPDEQNIGVTDDALEESGTKVEMEKEMEEMTESGEQ
VENYCDNNDEEDEEELEDQDDPKSHLSEENKRSPRVKTTPRRRRTNSKPTAEHAGVAEDD
SDSDEVPEVLLQTAAAMANSEEEGLVGSSWDAEDGNQHVRKQRLFGLVKTTPPDRGSRKR
NLKERSSSSSSSSSASSRRGSQDQGATVRMTRGRARKVARMTAQSGSSSSEVGGQELESG
PSSDSDDQRIKPLTEDVTLLGSGNFQQSSGDEMDIPTGPPLSVEDDDLENRIARQILLAQ
IRANLSSDSELESSSDERSESTKEEEQKKSKTASPETTDEEDNGGSTTSGSQSGSLHRHQ
LLRHGLALSEAETKKQKHGQEEDGKRKTREKAHQDVGCVVVSSSEETSDSDLWDELSHSE
HEEIGSQSLAHDEEHKESPSRTPNRPTPDPDEEFSPATEEHLKVTPRGRRQIRRVLEVEQ
LAQETQSAIRAEEERRKRLAERERLRLENERREREDADPEVILVSERPANSIAPLVLEQD
DATNKPVVQVHMHFLSKLKQHQRDGVRFMWDSCCESVQSVKSTPGSGCILAHCMGLGKTF
QVIVFLHTVLLSKELPLKRALVVCPLNTVLNWRSEFDQWQRGLKPNVLWVAELATAKSVA
VRVEMLNDWFRNGGVMIMGYEVFRILTHTNSAKYSRHKEDFRSMLLDPGPDLVVCDEGHV
LRNADSSISKAMRALNTRRRIILTGTPLQNNLTEYHCMVNFIKENLLGSLKEFRNRFINP
IQNGQCADSTPADVRLMKNRSHVLYQLMSGFIQRRDYSVLTSCLPPKREYVLSVRMTPLQ
CQLYSRYLQTRTGKGAGLNSLFQDLHVLSLIWTHPWCLKLAQLARNKGKEEAPVFKALDP
GLESVKPNASESTEAKSTRLVGDGERNTNPASLVTGSHQNPNSTNLASADFPGGEAGVIV
DNGPSADWYLPFVTAADAKVLEHSGKLQLLLEILHCAEELQDKVLVFSQSLISLDIIESF
LLYADESRGKDVCPYKGKKSWVKNKDYYRLDGTTSACARKRWAQEFNNTKNIRGRLFLIS
TRAGSLGINLVAANRVVVFDACWNPSYDIQSIFRVYRFGQKKHVSVYRFLAQGTMEQKIY
ERQVAKQSLSSRVLDQQQIQRHFTLSQLNELYHFQPELRPSKYTEMPADEVLSQLLQSCE
QLIVGYHEHNSLLDHREEEELSEEERRAAWDEYRAEKKASVQNPSEATPRNAIQGLQASV
QNPALGNTIQGLQLVHTQPPMTRGVVVYRPRNATPASLPVRLGTAQHAAWANNSYVRFLL
DQSNPAFSILQSKPKT
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgaagttctcagacccggaccggtggctggcggagggagtaagcttggtgag
ctgatcgggaggctccatgagtacctggcaacctctacagaagacaaaaatggaccagca
ctgcctgggcactggaatggaaccacatccagagaatatctggatgaacaagctcgtgtt
gcagaagaggcgggtggcccttcagaagtgggaatgttgtcatctcgttcaagaaggaaa
ccaactgttgtcactaagcacagcgggatgaacgagtccgatgtttcatctgagagtgga
gctgaggatgtgatatcggtccactcaagtgaccatgacaccaacctcctacccaaaggg
accgtctttgtgctgccagagccagtgtgtaatgaaactcgtgatgatttccgtggtcca
gaattccgctctagacgcattcacaagcagcacagagataatgctgaccggcgcagaggt
ggatatgagctggagagggtaaactgtagcgcgtgcggtcagcaggttaatcacttccaa
cgtgattctgtctatagacaccctatgcttaaagtactcatctgcaagagttgttttaag
tattatatgagtgatgacatcagcaaggattctgagggcatggacgagcaatgcaggtgg
tgtgctgagggaggcagtctaatcgggtgcgactactgcagtaatgctttctgtaagaaa
tgtgtgctgcgaaacctggggaggaaggagctgtccaccatcctggaggaggagaggaag
tggtactgttatgtgtgcagtccagagccattggtagagctggtgttgtcctgtgactct
gttctcgagaacctggagcaggctcagaaacgagcctcccgtaatgagccgaactctgtt
cgggggagagctaaggggggtcgtggtgcagccgacctattgggaccaggaggtggaccc
gtaccctctgcaggcctttatcaacgaatgcaacgctttgtagatgttaccacatctctg
agccattccttcaaggcagtcgttcaaagtgaaaaagacgacgaaggaaaactagagaga
attggacagcttaggatgtttcgagctgtactggatgatttgcaagcagccaacagagca
ttacaggaagccctggaccatgagctgactgggtccaaacgtagagacaacaagtccaga
gcgaagagtagacgaaggaaggctgtattagaacagagctctgagctcactaaagagctt
gtggtcaaactcacacctgtacctgtcagcccaaaacccatcagcaatactactacacct
atcattcttccaccacccgatgaacaaaatattggggtgacggatgatgcactggaagag
agtggcactaaggttgagatggagaaggagatggaggaaatgacagagagtggagagcag
gtggagaattattgtgataataatgatgaagaagacgaggaagaattggaggaccaagat
gacccaaaaagtcatttatcagaggagaataaacgttctccacgtgtgaaaaccacacca
cgccgccgccgaacaaactccaagccgactgctgagcatgccggtgtagctgaagatgac
tctgattctgatgaagtgcctgaagtgctgctccagactgccgcagctatggcaaacagt
gaggaagagggtttggtgggcagcagttgggacgcagaagatggaaaccagcatgtcaga
aagcagcggctctttggactggtaaaaaccacaccgccagacagaggctcacgaaagcgc
aatctcaaagagagatcttcatcatcttcatcatcctcttctgcgtcttcaagaagaggc
tcccaggaccagggggcgacagtcagaatgaccaggggacgagcccgcaaagtggccaga
atgactgcacagagcgggagttcgtccagtgaggtgggaggtcaggaactagagagtggg
ccaagcagcgactccgatgatcagaggatcaaaccactgaccgaggatgtcacattgctg
ggctctggaaatttccagcagtcttctggtgatgagatggacatccctacaggtcctcct
ttgtctgtggaggacgatgatttagaaaatagaattgcgaggcagattctgctggctcag
atcagagctaacctatcctccgactcagagctggagtccagctctgatgagcgttcagag
agcaccaaagaagaggagcaaaaaaagagcaagactgcatctcctgagacaacggatgag
gaagacaatggtggttctacaaccagtggttcacaatcagggtcactgcaccgccaccag
ttgcttcgacatggtcttgctttatcagaggctgaaacaaaaaaacaaaaacatgggcag
gaggaggatgggaaaaggaaaacaagagaaaaagcacaccaagatgtaggatgtgttgtt
gtgagcagcagtgaagaaacaagcgattcagacttgtgggatgagctcagtcattcagag
catgaggaaatagggtctcagtcgctcgctcatgatgaagagcataaagagagtccatcc
cgcacaccaaacaggcccacccctgatcctgatgaagagttttctccagccactgaggag
cacttgaaggttacacctcgcggacgcaggcagatcagacgggtcctggaggtggagcag
ctggcgcaggagacacagagcgctattagagcagaggaggagcgcaggaagaggctcgcg
gagagagaaagactcaggctggagaatgagaggagagagcgagaggacgcagacccagag
gtcattttggtgtctgagagaccagctaatagcatcgcaccattggttcttgagcaagat
gatgccacaaataagcctgtggtgcaagtgcacatgcactttcttagcaaactcaaacaa
caccaaagagatggtgtgcggttcatgtgggacagctgctgtgaatctgttcagagtgtg
aagtcaactccaggctccggctgtattctggctcattgcatgggtctgggcaaaaccttt
caggtcatcgtgttccttcacaccgtgctgttaagtaaagagctgccgctgaaaagagct
ctggtggtttgtcccctcaacactgtgctgaactggaggagcgagtttgaccagtggcag
aggggcttaaaacccaacgtcctgtgggtggcagagttggccacagcaaagtcagtggct
gttcgtgttgagatgttgaacgactggtttaggaatggtggtgtgatgatcatgggttat
gaggtttttcgtattctgacacacacaaatagtgcaaaatacagcagacacaaagaagac
ttccgctctatgctcctggatcctggccctgatctggtggtgtgtgacgagggtcacgtc
ctcaggaacgcagactctagcatctcaaaagccatgcgagccctgaacacacgcagaagg
atcatactaacaggaacaccgcttcagaataacctcaccgagtatcactgcatggtaaac
ttcataaaggagaaccttctgggttccctaaaagagttccggaaccgatttattaatcca
atccagaatgggcagtgtgcagactccacccctgcggatgtcaggctgatgaagaacaga
tcacacgtcctatatcagctcatgtcaggattcatacagaggcgggactactccgttttg
acatcctgtttgccgcccaaacgcgagtatgtgctgtcagtcaggatgacgcctctacag
tgtcagttatactcacgctatctgcagactcgcacagggaaaggagcaggactgaacagt
ttgtttcaggaccttcatgttttgagcttgatatggactcatccctggtgtctaaaactt
gctcagctggcccggaataagggaaaagaggaagctccagtgttcaaggcgctggatcca
ggtttagaatctgtgaagccaaatgcctcagaaagtacagaggcaaagagcacacgttta
gtgggtgatggagagagaaataccaatccagcctctttagtcaccgggtctcatcaaaat
ccaaactccacaaacctagcatcagcagattttcctggtggggaagctggggttattgtg
gataatggaccatctgcagactggtatctgccatttgtaacagcagctgatgccaaagta
ctggagcattctgggaaattacagttgctgctagagattttacactgtgcagaggaacta
caggacaaagtgttggtgttcagtcagtctctgatatcactggacattattgagagtttc
ctcctgtatgcagatgagagcagggggaaggacgtttgtccatataaaggaaagaaatcg
tgggtaaaaaataaagattattatcgtttggatggcaccaccagtgcttgtgctcgtaag
agatgggctcaggagtttaacaacactaaaaacataagagggaggctgtttctgatctcc
acccgcgccggctctctgggaattaacctggttgctgcaaaccgggttgtggtgtttgat
gcttgctggaatccatcatatgacattcagagcatcttcagagtctatcgcttcgggcag
aaaaaacatgtttctgtctaccgttttcttgctcagggcacaatggagcagaagatttat
gagcggcaggttgctaaacagtctttgtcatcgcgtgttctggaccagcagcaaattcag
aggcacttcacactcagccagctgaatgagctgtaccacttccaaccagaactacggccc
agcaaatacacagaaatgcctgcggatgaggtgttgtcccaactgctgcagagctgtgag
cagctcatagtgggttatcatgagcacaactcactgttagaccaccgggaggaagaggag
ctgagcgaggaagagcgcagagcagcctgggatgagtaccgcgcagaaaagaaggcctct
gtacagaaccccagtgaagccacacccagaaacgccatccaggggctacaggcctctgta
cagaaccccgcactcggaaacaccatccaggggctgcagcttgttcatactcagccgcct
atgactcgtggagtcgttgtctataggcccaggaacgctactccagcttcactgccagtc
agactaggcactgcccagcatgctgcttgggctaacaactcctacgtcagattcctgctg
gaccaatccaatccagctttctcaattttgcagtccaaacccaaaacctaa
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integrated database retrieval system
