Danio aesculapii (panther danio): 130229680
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Entry
130229680 CDS
T11734
Symbol
tia1
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
daes Danio aesculapii (panther danio)
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daes03019
]
130229680 (tia1)
03041 Spliceosome [BR:
daes03041
]
130229680 (tia1)
Messenger RNA biogenesis [BR:
daes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130229680 (tia1)
Spliceosome [BR:
daes03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130229680 (tia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Nup35_RRM_2
Calcipressin
Motif
Other DBs
NCBI-GeneID:
130229680
NCBI-ProteinID:
XP_056314581
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Position
5:60897026..60911425
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AA seq
386 aa
AA seq
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MMDDEQPKTLYVGNLSRDVTEALIVQLFGQIGPCKSCKMIVDTAGNDPYCFVEFFEHRHA
AASLAAMNGRKIMGKEVKVNWATSPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
ATYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEIRVFPDKG
YSFVRFNSHESAAHAIVSVNGTSLEGHIVKCYWGKETTDMVSPMQQVQVPQQNKVGFAAQ
PYGQWGQWYGNAQQISQYVPNGWQVPTYGVYGQAWNQQGFNHLQAGAGWPGVGAVSNGGV
VEPAQGVNGTVLANQSTMGTAGYHTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgagcagcccaagaccctgtatgttggaaacctgtcacgagatgtgacc
gaggcccttattgtgcagctctttggtcagattggcccctgcaagagctgtaaaatgatt
gtcgatacggcaggtaacgacccatactgctttgtggagttcttcgaacacaggcatgcg
gcggcctcactcgcagccatgaatgggcgtaaaataatgggtaaggaggtaaaggtcaat
tgggccacatcaccaagcagccagaaaaaagacacaagcaatcacttccacgtctttgtt
ggagacctcagcccagaaatcaccactgatgacatcagagctgcctttgcaccttttggc
aggatatcagatgctcgtgtagtgaaagacatggcgacggggaagtcaaaaggctatggt
tttgtttcattcttcaacaaatgggatgcagagaatgccattcagcagatgggaggtcag
tggttgggtggccggcagatcagaaccaactgggctacaagaaaacctccagcacctaaa
gccacctatgaaacgaacaccaagcacttgtcgtttgatgaagtagtgaatcagtccagt
cccagcaactgcactgtctattgtggtggagtcactacaggccttacagaacaactcatg
agacaaacattttccccttttggccaaatcatggaaattcgtgtgttcccagacaaaggc
tactcgtttgtgcggttcaactctcatgaaagtgcagctcatgcaatagtgtcagtaaat
ggtacatccttagaaggtcacatagtgaaatgttactggggtaaggagactacagacatg
gtgagccccatgcagcaggtgcaggtaccccagcagaacaaagttggttttgctgcgcaa
ccatatggccagtggggacaatggtacggcaacgcacagcaaattagtcagtatgtccct
aatggctggcaggtacccacttacggcgtgtacggacaggcctggaatcagcagggcttc
aatcacttacaggctggcgcaggatggcccggtgtgggtgccgtgagcaacggaggcgtt
gtggagcctgcgcaaggagtcaacgggaccgtcctggccaaccagtccaccatgggcact
gcaggataccacacacactga
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