Danio aesculapii (panther danio): 130229840
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Entry
130229840 CDS
T11734
Symbol
vps33a
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
daes Danio aesculapii (panther danio)
Pathway
daes04140
Autophagy - animal
daes04142
Lysosome biogenesis
daes04145
Phagocytosis
daes04148
Efferocytosis
daes05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
130229840 (vps33a)
04142 Lysosome biogenesis
130229840 (vps33a)
04140 Autophagy - animal
130229840 (vps33a)
04148 Efferocytosis
130229840 (vps33a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130229840 (vps33a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
daes04131
]
130229840 (vps33a)
Membrane trafficking [BR:
daes04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130229840 (vps33a)
Hops complex
130229840 (vps33a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
RMD9_mid
DUF7816
Motif
Other DBs
NCBI-GeneID:
130229840
NCBI-ProteinID:
XP_056314817
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All DBs
Position
5:71109132..71131832
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AA seq
599 aa
AA seq
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MASHLFCGRVNLNILREAARKDLREFLDKCSGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGGRIPSAAVKNIVFFVRPRLELMDIIAENVSSEDKLQPREFHILFVPRRSLLC
EQRLKEKGVLNSFTNIDEYILDLIPYDGDLLSMESESSFRECYLENDQTSLYHAAKGLMT
LQALYGTIPQIFGKGECARHVANMMLRMKREFAGSHTQILPVFDTLLLLDRNVDLLTPLA
TQLTYEGLIDEIFGITNGYVKLPPEKFAQKKQGEGGKDLPTEPKKLQLNSAEELYAEIRD
KNFNAVGAALSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARSSLANHTSIAELI
KDITTSEVFFDSLTVEQEFMTGVDTDKVSTYIEDCIAQKDPLIKILRLVCMQSVCNNGLK
QKVLDYYKREILQTYGYKHILTLKNLEKVGLLKPQSTMRNNYPTIRKTLKLWMEDANEQN
PNDISYVYSGYAPLSVRLTQVLARPGWRSIEEVLKMLPGPHFEERQQVPTGLHKKRQPGE
NRTTLVFFLGGVTYAEIAALRFLSHMEDSGTEYIIATTKLINGTSWVKSLMDHPEENQQ
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcacatttgttttgcggtagagtaaacctaaatattttgagagaggctgcacga
aaagacctgcgcgagtttttggataaatgttcgggaagcaaggccattgtttgggacgag
tatctaactggacctttcgggttgattgctcagtattcactattgaaggaacatgaggtg
gagaaaatgttcactcttaaaggaggccgaataccgtccgccgccgtcaagaatattgtc
ttctttgttcgaccgaggttggagttaatggacatcattgcagaaaatgtttcgagtgag
gataaactgcagcctcgtgagtttcacattttgttcgtgcctcgccggagcctcctgtgt
gagcagcggctgaaggagaaaggcgtcctgaactccttcacaaacatcgacgagtacatc
ctcgacctcatcccttatgatggagatctgctttccatggagtctgagagctcctttaga
gagtgttatttagagaatgatcagacgagcctctatcatgctgccaaaggcctcatgact
ttgcaagcactttatggaacgataccacagatatttggcaaaggagagtgtgcacggcac
gtggccaacatgatgctgcggatgaagagagagtttgcaggcagtcacactcagatcctg
cccgtgtttgacacacttctgctgctggatcgaaacgtggatttactcacaccgctcgcc
acgcagctcacatacgagggtctcatcgatgagatctttggcatcaccaatggttatgtg
aagctcccgcctgaaaagtttgcacagaagaaacagggtgaaggtggaaaagatctgccc
accgagcccaaaaaactgcagctgaactccgctgaggagctttacgctgagatacgcgac
aagaacttcaatgctgtcggtgcggctctcagcaagaaggccaagattatttcagctgcg
tttgaggagcgacacaacgctaaaactgtgggagaaattaagcagtttgtttcccagctg
cctcacatgcaggcagcgcgcagctctctggccaatcacacctccatcgctgaacttatc
aaagacatcaccacttcagaggttttctttgacagtctgacggttgagcaggagttcatg
actggagtcgacacagacaaggtcagcacttatattgaagactgcattgcgcagaaagac
ccgctgataaaaatcctgcgactggtgtgtatgcagtctgtctgcaacaacggactcaaa
cagaaagttctggactactataagagggagatccttcagacgtacggatacaagcacatt
ctgacccttaagaacttggagaaggttggtttactcaaacctcagagcaccatgaggaac
aactaccccacaatcaggaaaacactcaaactgtggatggaggatgctaacgaacagaac
ccgaatgatatctcatacgtgtacagcggttacgctccgctcagcgttcggctcactcaa
gttctggcgcgtcctggatggaggagcatcgaggaggtgctgaagatgctgcctgggcca
cactttgaggaacgccagcaggttcccacaggcctccacaagaagcgtcagcctggagaa
aaccgcaccactttagtcttctttctgggcggcgtgacgtacgctgaaatcgccgctctg
cgcttcctctctcatatggaggacagcgggaccgagtacatcatcgccaccaccaaactg
atcaacggcaccagctgggtcaaatctctaatggatcacccagaagaaaaccagcagtga
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