Danio aesculapii (panther danio): 130232191
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Entry
130232191 CDS
T11734
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
daes Danio aesculapii (panther danio)
Pathway
daes03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130232191 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
daes03021
]
130232191 (smarcd3b)
03036 Chromosome and associated proteins [BR:
daes03036
]
130232191 (smarcd3b)
Transcription machinery [BR:
daes03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130232191 (smarcd3b)
Chromosome and associated proteins [BR:
daes03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130232191 (smarcd3b)
PBAF complex
130232191 (smarcd3b)
GBAF(ncBAF) complex
130232191 (smarcd3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIFT
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
130232191
NCBI-ProteinID:
XP_056317927
LinkDB
All DBs
Position
7:complement(40268669..40319222)
Genome browser
AA seq
506 aa
AA seq
DB search
MASEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
TNQSMETSRKRPNPAQQQIQQQAVQNRNRKKPVGFPGPNEMPGRQMDLRETQSDPTLGSN
AKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKL
RLYISNTFNAAKPDAEDSEGSIASWELRVEGKLLDDPGKMKRKFSSFFKSLVIELDKDLY
GPDNHLVEWHRTGTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHT
QTRSSIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPD
PIVINHIISVDPNDQKKTACYDIDVEVEDPLKAQMSSFLLSTANQQEIASLDNKIHETIE
SINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVAGNPEEERRAEFYHQPWSQE
AVSRYFYCKIQQRRQELEQALALRNT
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggaggagaccgctggaggagcgcgcaaagccaccaagagcaaactatttgag
ttcctcgtccatggagtgcgacctggcatgccatcaggagcacgaatgcctcatcaaggg
gccccgatggggcctccaggaccaccatatggaggaagtcctgctgtccggcctggactt
accaatcagtccatggagaccagtcgcaaacggcccaatcctgcacagcagcagatccag
cagcaggccgtacagaaccgaaacagaaagaagcctgttggatttcctggaccaaatgag
atgccagggaggcagatggacttgagagagacccaatcagatcccacacttggatcaaat
gccaagaggaggaagatggctgataagatccttccacaaaggatccgtgagcttgttcca
gagtcacaggcgtatatggatctgttggcattcgagcgcaaattagaccagaccataatg
cgcaaacgggtggacatccaagaggcacttaagagacccatgaagcaaaagcgcaaactg
cgtctctacatctccaacacgtttaatgctgccaagcctgatgcagaggactctgaaggc
agcattgcatcttgggagctgcgtgtggagggcaaactgctggatgatccaggaaagatg
aagaggaagttctcctcattcttcaagagtttggtgattgagcttgacaaagacctctat
ggccctgataaccatttggttgagtggcatcgtaccggcaccactcaggagacagacggc
tttcaggtgaaaagacctggagatgttaatgtgcgctgcaccctgctgttaatgctggat
taccagcctcctcagtttaagctggatccacgtctggctcgtctgctgggcattcacaca
cagacccgctccagtatcatacaggccctctggcagtacgtcaaaaccaacaaactgcag
gactcgcatgacaaggagtacatcaactgtgacaagtactttcagcagatctttgactgt
ccacgtctgaagttctctgaaattccccagcgcctcaccaaccttttactgccccccgac
cctattgtcatcaaccacatcatcagcgtggaccctaatgatcagaagaagacggcatgt
tatgacatcgatgtagaggtggaagatcctcttaaagcacaaatgagcagcttcctgctc
tctacagccaatcagcaagagatcgcctctctggacaacaagatccatgagaccatcgag
tccatcaatcagctgaagattcagagagatttcatgctcagtttctccagagatcccaaa
ggctacatccaggactggctcaaatcccaaagcagagatctgaagctgatgacagatgtt
gcggggaacccggaggaagagagaagagcagagttttatcatcagccttggtctcaggaa
gctgtcagccgttacttctactgtaagattcagcagaggaggcaggagctggaacaggcc
ttggccttgaggaacacctag
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