Danio aesculapii (panther danio): 130232536
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Entry
130232536 CDS
T11734
Symbol
arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
daes Danio aesculapii (panther danio)
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
daes04131
]
130232536 (arhgef40)
Membrane trafficking [BR:
daes04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130232536 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
PH
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
130232536
NCBI-ProteinID:
XP_056318462
LinkDB
All DBs
Position
7:73239232..73298795
Genome browser
AA seq
1757 aa
AA seq
DB search
MGSEAVEDCVQGALSSLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDFFIPAKHLLH
RLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRLLRSTDFYLQVVPFSTRCPRLA
LKCLAPGGRNVQEVLVPESQHPLVFTSEWLHCINKERGCKREGGGCLDTCLVSTSDGVVR
IPWEEVVYPKLLHNPSDLLQDKPDPTDLSSGGLGLGWGGSSEERDSWSWDEEDDLPPDGN
EADIEAALECLRRSSDGHLVADGAGDYVELLEPRGGPDGGADPKQRYLEMHGICKTKTLP
LCRRGKAIRLRKGKGRGYGRTESGARGGSLVRRDSNNNGKDGVVSCSDLATSRPLPRVID
LGRQRRSYSPSILHADEGAGDPVGLECRSDCMDNPAKERKPGVGKERDGTGGTLPWEECQ
RKKSSSRRCSTDANDAKCIANGLGDGQQDHSQSSHCGCDDKILASTLDIRQDIATSQNQS
NALDDGAIPLSANGKTEDTNKQLAEQSRTRSLQDSSTNNAPGSSDCAKRRNKHSDTTCEE
KMDINMSPSGTVGAIGEKQVGKSENSVCPRGKEVKTGGFRAPRRKRKAKGGKGKAKSNGR
GQQKGKGDQITSKNQTKATQPICQSSQSEEASLQSKKSICCEASSDDKTDAKSKAKDGES
QSCTSFPDHSQNELRLSQSAAHVESKSPPTHLKDLDLNLLQSGKLILTGTMDRLGRALVV
TESHLPEDGWTTDEMIKVLSCYYTITRPMAKEKGLTVIVDSRKSAPSELCLSALKLFKEQ
AATGLDSVLILTEELDESTQSCLEGIEMHTVRGTGVLQQFVDKQHLPREMGGDLNHSHDD
WLTFRLSLEQLTERCESALTLLGDALLSMDTEPLPDCIKSVPLSVDKHRQLMTGILTDQR
LTELQQRGGAWLAGLANGTSGLAQRSPDCKAAFAVTSDLYDSVDDALHRLVRSSNQRSRD
LEALGRLAALVDKLEKCERDVEQIQDQLKDYKDPPLSLSRLTLKQHKFRSFREAAMDLHS
ETLVLLAEVESWSELDWSGLAAVLEKLPPVREKVRDMSHCLSDRWTQLDNTQRLLSTLTE
ASQWCDVVSSSSPSSSSSSPLSSLPPIPPSRFQDARALALDLGGGALLDLWSQTLERYQK
TLAEFKSRILQAERGSSVAQGQEPDLGGRWRTPAPSSTSSLGDLEGEIEPDWCPGGEGGM
QSWGSLASLFRPQNCSTLKIGEEKKKEGVNPGGGKFLQNLLHPAKKNPTDAPLPPKPPRK
RHPSFDLQALLAPRRAGATPKPTESTSGQSSPLSWLGRKAMTDPILTAGVATAVPGWRDP
AGGGAGGEAGGGGVLIRGVEVSSKEVADHTGFTRQHVLLNRTERGTGMERAGVTAQSKLY
LQWCRLVSTERQYVAVLKGVEENYLPLLESPDAPSALRGKTESLFCNWKSLSAFHSQLLL
PAMEGALSQTLQQTDCFTKYKDQFLLYSHYIRMRPESDALIISQAADFFKMKLCSSLVPA
PPFPQCLSAPLQRLQQYSQALEELGGLNPGSDSALSIIRHAHRHGDDLRASELISGCPIP
VAERGDLVRQGELCVCGGGRRKKTGIRNVFLYQNFMIFTKHKTPNPGTSVYSFKHSIKTG
EMGLTQSVGEDGLRFEVWVRQASRTRDCLTLQTASAQERASWTHDIAQLLWTHAMHNTEL
CLKESLCMGISSKLLLDVTGAQSAELDSSSSLNDRVQSSCSDSSSVGSMKEDSPASQTRR
SAEHTGHTQSSSPSTSV
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgggttcagaggcggtcgaggactgtgtgcagggggcgctctcgtctctgtatcctccg
tttgaaagcaccgctcctcctctcctctctcaggtgttctccgtactcgagtccacctat
cagcatgacagcttgagatatctgctggatttcttcattcctgccaagcaccttctgcat
agattacagcagcatgcatgttctcagtatctaggctgtctcttcttgcactctggttgg
ccactatgtttgggggagaaggtagtagtacagctctctactttggactggagactcctg
cgaagtactgacttctacctgcaggtggtccccttctcgacacgctgtcctcgacttgct
cttaagtgccttgcaccaggtggacgaaatgtacaggaggtcttagtgccagaatcacag
cacccattggtgttcacctcagagtggctgcactgcatcaacaaagaacgtggctgcaag
agagaaggtggaggatgtttggacacctgtcttgtgagtacaagtgacggagttgtccgt
attccatgggaagaggtggtctatcctaaactcctgcacaatccatccgatcttcttcaa
gacaagcctgacccaactgacctgtcctcagggggtctgggccttggttggggtggctct
tcagaagagcgtgattcctggtcctgggatgaagaggatgacttgcctccagatgggaac
gaggcagatattgaggctgcattagaatgtctgcgcagaagcagtgatggccaccttgta
gctgatggcgctggagattatgtagagctgctagagcccagaggaggtccagatggtggt
gctgatcccaaacagcgctacttggaaatgcacgggatatgtaagactaaaactttacct
ctttgtagaaggggtaaagcaatacgactacgaaaggggaagggaagagggtatgggagg
actgaatctggtgctaggggcggaagtctggtacgaagggatagcaacaacaatggtaag
gatggtgtagtttcctgtagtgacttggctacctcacgacctttgcctcgtgtcattgat
ttgggtcgccaaaggaggtcgtattccccttcaatcttacatgctgatgaaggtgctgga
gacccagtgggcttggaatgtagatctgattgtatggacaatccggccaaagagagaaag
ccaggggtaggaaaagagagagatgggactgggggtacactgccctgggaagagtgtcaa
agaaagaaaagttccagcaggcgatgttcaacagatgctaatgatgcaaagtgcattgca
aacggtcttggagatggacaacaggaccacagtcaaagctcacactgtggttgtgatgat
aaaatattggccagcactttagacattagacaggacattgcaacatctcaaaatcagtcc
aatgctttagatgatggagctatcccattgtctgctaatgggaaaacagaagacactaac
aagcaattggctgaacagtcaaggacaaggtccctccaggattcttccacaaacaatgca
cctggttcatcagattgtgcaaaaaggagaaacaaacattcagacactacctgtgaggag
aaaatggatataaatatgtcaccatcaggtactgtgggtgccattggagaaaagcaggtt
ggaaagtcagagaactctgtttgtcccagaggaaaagaagtaaaaacgggtggatttaga
gctcccaggaggaaaaggaaagccaaaggaggtaaagggaaggccaaatctaatggccgt
ggacagcaaaaaggcaagggtgaccaaatcacctcaaagaaccaaaccaaagccacccaa
ccaatttgccagtctagccaatcagaggaggcttctctgcaatccaaaaagtccatatgc
tgtgaagcatcctccgatgataaaacagatgcaaagtcaaaagccaaagatggagaaagc
cagtcatgcacatccttccctgatcattcccaaaacgagttgagattatctcagtctgca
gctcacgtggagtccaaatctccccctactcatcttaaagacttagatttaaatcttctt
cagtcgggaaagctaatattaacaggtactatggaccgactggggcgagcattggtagtc
actgaaagtcaccttccggaggatggctggaccacagatgaaatgatcaaagttttgtcc
tgctattacaccatcactagacctatggccaaagagaaagggctgactgtgatagtggac
agcaggaaatctgccccgtctgaactctgcctttcagcactgaagctcttcaaggaacag
gcagcaacagggctcgactcagttcttatcctaactgaggaactggacgaatcgacccaa
tcgtgtctggagggaatagagatgcatacagtacgaggtacgggtgtccttcagcagttt
gtggacaagcagcatttgcccagagaaatgggtggagatttgaaccactcacacgatgac
tggctcactttcagactgagtctggagcagctgaccgagcgctgtgagagcgccctcacc
ctgcttggagacgcactgctgtctatggacacagaaccactaccagattgtattaagagc
gttcccctgagcgtggacaaacacaggcagttaatgacaggcatcctcactgaccaacgg
ctgactgagctgcagcagagaggcggggcttggctggcaggtctggccaatgggacgtca
ggattggcacagagatcaccagactgcaaggctgcttttgcggtgacctcggacctttac
gacagtgtggacgatgcacttcacagactggtgcgttcctccaatcagaggagtcgcgac
ctggaagcactcgggagattggctgcactcgtggataaactggagaagtgtgagcgagac
gtggagcagattcaggatcagctgaaggattataaagatcctcctctgtctctcagcaga
ctgaccctcaaacagcacaaattcaggagcttcagagaggccgctatggatctccacagt
gagacactagtgctgctggcggaggtggagagctggtctgagctggactggtctggtctc
gctgctgtgctggaaaaactgcctccagttcgggagaaagtccgagacatgtctcactgt
ctgtcggaccgctggacacaactggacaacactcagcggctgctgtccacgctcactgaa
gcgtctcaatggtgtgacgtggtgtcgtcctcctctccatcatcctcgtcttcctctcct
ctttcatctctgcctcccatccctccgtcacgcttccaggacgctcgagctctggctctg
gatctgggcggaggtgctttgctggatctctggtctcagactctggagcgctaccagaaa
accctggcggagttcaagagccgaatcctccaggcagagagaggctcgtctgtggcccag
ggtcaggagccggaccttgggggcagatggaggactcctgctcccagcagcacctccagt
ctgggggatttagaaggcgagatcgagcccgactggtgccctggaggagaggggggcatg
cagtcctgggggtcactggcgtcactttttaggccacaaaactgctcaacgctcaagatc
ggagaggagaagaagaaagaaggggtgaatccaggaggagggaagtttctgcagaatctg
ctgcacccggccaagaaaaatcccacagatgcaccgctccctcccaaaccccctcgaaag
cggcatcccagttttgacctccaggctctgttagcccctcgacgtgcaggagccacacct
aaacccaccgagtccacttccggccagtcgtctccgctgtcctggctgggccgtaaagct
atgacagatccaatcctcactgcgggggtggcaacagcggttccgggatggagggatccg
gctggaggtggagctgggggagaagcaggaggtgggggagtgctgatcagaggagtggag
gtcagcagtaaagaagtggccgatcatacaggcttcacacgccaacacgtactgctaaac
cgcactgagagagggacggggatggagagagctggagtcactgcacagagtaagctgtat
ctgcagtggtgtcggctggtcagcacagagagacagtacgtggctgttcttaaaggtgtg
gaggaaaactacctgcccctcctggagtctcctgacgccccgtccgctctgagaggaaaa
actgagtcgcttttctgtaactggaaaagcctctctgcgttccactcgcagttactcctg
ccggccatggagggcgcactctcccagaccctccagcagaccgactgcttcaccaaatac
aaggatcagtttcttctgtattcccactatatccgcatgaggccggagtcggatgctctg
atcatcagtcaggctgctgatttcttcaagatgaagctgtgttcgtccctggttcccgct
cctcccttcccgcagtgtctttcggctcctcttcagagactccagcagtactctcaggct
ctggaggaactgggcggacttaaccccggctctgactccgccctctccatcatcagacac
gcccatcgccacggagacgacctgcgggccagtgagctcatcagcggctgtccgatccca
gtggccgagcgtggagatcttgtgcgtcagggtgagctgtgtgtgtgtggtggaggacga
cgcaagaaaacaggaatcagaaacgttttcctgtatcagaacttcatgatcttcaccaaa
cacaaaacaccaaacccgggaaccagcgtgtacagcttcaaacacagcattaagacaggt
gaaatgggtctcactcagagtgtcggtgaggacggcctgaggttcgaggtttgggttcgg
caggcatctcgaacccgggactgtttgaccctgcagacggccagcgctcaggagagagcg
agctggacacacgacatcgctcagctgctgtggacacatgctatgcacaacaccgagttg
tgtcttaaggagtctctctgtatggggatttccagtaagctgttactggatgtgactgga
gctcaatctgcagaactggactccagctccagcctgaatgacagagttcagagcagttgt
tcagattcgtcttctgtgggcagcatgaaggaggattcacctgcatcgcagacaaggagg
agcgcagagcacacgggacacacacagagctcttctccctccacctcagtgtga
DBGET
integrated database retrieval system
