KEGG   Danio aesculapii (panther danio): 130233208
Entry
130233208         CDS       T11734                                 
Symbol
kdm5c
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
daes  Danio aesculapii (panther danio)
Brite
KEGG Orthology (KO) [BR:daes00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:daes01009]
    130233208 (kdm5c)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:daes03036]
    130233208 (kdm5c)
Enzymes [BR:daes01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     130233208 (kdm5c)
Protein phosphatases and associated proteins [BR:daes01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     130233208 (kdm5c)
Chromosome and associated proteins [BR:daes03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130233208 (kdm5c)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD PHD_JHD1
Other DBs
NCBI-GeneID: 130233208
NCBI-ProteinID: XP_056319111
LinkDB
Position
8:9239396..9279090
AA seq 1578 aa
MMDGGEEFVPPPECPVFEPSWEEFADPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DNFHFTPRIQRLNELEAETRVKLNYLDRIAKFWEIQGSSLKIPNLERRILDLFSLAKIVT
EEGGFESVSKERRWARVAQKLGYPPGKNIGSLLRSHYERIVYPFELFQSGASLPPRKPRQ
YDSDEVDREYKPHSIPLRQSVPPSKMSSYGRRANRLQPEGPEDPTHHPLTTGSQHISSPE
PTEEDIEKNPELKKLQIYGAGPKMMGLGLVPRDKTRKKDDLPQTVIVRDSAVKDEPGETA
VTKSDPDIPPPPPNLTIKEDVDDDKSHIDKSNDPSDEPCTKMTMRLRRNLNNPQFVDSFV
CRMCGRGDEDEKLMLCDGCDDNYHTFCLIPPLTDPPKGNWRCPKCIAEECKKPSEAFGFE
QATREYTLQSFGEMADTFKADYFNMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADIHS
KEFGSGFPVNNGKRHLTEEEENYARSGWNLNVMPVLEQSLLCHINADISGMKVPWLYVGM
VFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSSAAEKLEEVMKKLTPELFEFQPDLLHQ
LVTIMNPNILMNHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPTG
RSCIEHYRQLRRYCVFSQEELTCKMAACPEKLDLNLAAATHREMFIIVQEERKLRKSLLE
RGIKEAEREAFELLPDDERQCDKCKTTCFLSALACSNCQERLVCLYHAQDLCSCPSEKLY
LRYRYTLDELLAMLHRLKVRAESFDSWANRVKEALEQDEGNKIDIKDLEVLKEEAADKKF
PNNELLQRLSTVFTDIEKCESSSTELLSNSQSSRITLKELKTLVDTMQNLPCVIKQQEEV
QVILQKIEEFDSRAQVLVDSTKSEWKQDSPLPAATEIRALLEEGASLPVIAPACELLSGL
LEQGRWLGEVRRTLGPEGSEVTLSVLRNLMESGCNVPQSVSVETAMAELQELLTIAERWE
EKAQICLEDRQKHHLSTLEAIVNEAQLIPVQLPNILSLQACLSRARAWVTDLEEIQNGEH
YPCLDDLEGLVAIGRDLPVKMEELKQLELQVASAHSWREKASKTFLKKNGQHSLLEVLCP
CVEKSKKMEDNSMATEADSDVNVLGLTAQDLRDPGAIVMAFKEGERLEKEALLRLQQVNL
AKPSIENGASTDQDSIKTEKKQSNSMETDTPLNSDSPMLQNGGSSHSLTSSQTVCVCGGP
PRPLLHRCHLCKDWFHGGCVSFPPLLASSDTHLAKPLCWWDWNTRFLCPRCQRSRRPRLE
TILALLVALQRLPVRLPEGEALQCLTERAINWQGKAKQALDTPEVQGALERLQQVEDEMV
SIKEEEPEEKKKWNGDTVIVLSDSEEAEDGVIDLTEDGNSPKKSEKNGVNGTQSGCENGI
GRKLSTREVTGVESLLSLVPSLKGPVVELNTSVRAQLEELQLEGDLLEVTLDQTHTIYRI
LQAASQPPQDTLRTLIQIELQEQRSSGRGNKSKDSKRKRKSQKTEGEPKSTEASDCKKTK
ALNHSPPTDTHRDVVMFS
NT seq 4737 nt   +upstreamnt  +downstreamnt
atgatggatggaggggaggagtttgttccaccacccgaatgtccagtatttgaaccatca
tgggaggagtttgcagatccattgggatatattgccaaaatccgcccaatagcagaaaag
tctggaatatgcaagattcgtccaccagccgactggcagccaccatttgctgtggaggtg
gacaattttcatttcacaccccgtattcagaggctcaatgagctggaggctgagacacga
gtaaagctgaattatctagacagaattgccaagttctgggagatccagggatcctctctg
aagatccccaatttagagcgacgtattctggatctgttcagcttggccaagattgtcaca
gaggaaggtggctttgagtcggtgagtaaggaaagacgctgggcacgtgtggcacagaaa
cttggttatcctcctggaaaaaacattggctctctcttgcggtcccactatgagaggatt
gtgtatccatttgagttgttccagtctggagccagtttaccgccacgtaaacccaggcaa
tatgacagtgatgaggtagaccgagaatacaaaccccactccattcctttgcgtcaatca
gtgccaccatccaagatgagcagctatggacgaagggccaatcgccttcaacctgagggt
ccagaggatccaactcaccaccctcttacaactggctctcaacacatctcctcgccggag
cctacagaagaagacattgagaagaaccctgagctgaaaaagctacagatctatggggct
ggacctaaaatgatgggccttggtcttgtgcctcgagacaagacgcggaagaaagatgat
ctgccgcagactgtaatcgtgcgggacagtgctgtgaaggatgaacctggagagacagcg
gtcacaaaatcagatccagacattccaccgccacccccaaatctcaccattaaggaggat
gttgatgatgacaaaagtcacatagacaaatctaatgatcccagtgatgagccttgcact
aagatgaccatgagactccgacgcaacctcaataatccacagtttgtggactcgtttgtg
tgtcgaatgtgtggacgcggggatgaggacgagaagttgatgctctgtgatggatgtgat
gataattaccacacattctgcctgatacctccactcacagacccacccaagggcaactgg
cgctgtcccaaatgcatagcagaggagtgtaagaagccatcagaagcattcggcttcgaa
caggccacaagagagtacacgttacagagcttcggtgaaatggccgacactttcaaagca
gactacttcaacatgcctgtccatatggtacccacagagttggttgaaaaggagttttgg
aggttggttagcagtattgaagaagatgtaactgtagaatatggtgccgatattcactca
aaagaatttggtagtggttttcctgtcaacaatggcaagagacacttaacagaggaggaa
gagaattatgcccgcagcggctggaacctgaatgttatgccagtgttggaacagtcgttg
ttgtgccacatcaatgcagatatctctggcatgaaggtgccatggctatatgtgggcatg
gtgttctctgctttctgttggcacatagaggaccactggagttactccatcaattattta
cactggggtgagcccaaaacatggtatggagttccaagttcagctgctgagaagttggag
gaggtgatgaagaaactcacacccgagctatttgagttccagccagacctgctccaccag
ctagtcaccatcatgaacccaaatatactcatgaatcatggagtgccggtggttcggaca
aatcagtgtgctggggagtttgtcatcacctttccacgagcttaccacagcggttttaat
cagggatataactttgccgaagcagtcaacttctgcactgccgactggttgcccacaggg
cgctcttgtattgagcattaccggcagctgaggcgctactgtgtgttctctcaagaggaa
ctcacctgcaagatggcggcctgcccagaaaagctggatctaaacctggcagccgccaca
cacagggagatgttcatcatagtgcaggaagagaggaaactacgcaaaagcctactggaa
aggggcatcaaggaagctgaaagggaggcctttgagttgctgcctgatgatgaaaggcag
tgtgacaaatgtaagaccacctgcttcctctcagccctggcatgttcgaactgccaggag
cgtctcgtatgcctctatcatgcccaggacctctgctcttgcccgagtgaaaaactctac
ctcaggtatcgttatactctggatgaactattggctatgttgcatcggctaaaagttcgc
gctgagtcttttgactcttgggccaaccgtgtgaaggaagccctagagcaggatgaaggc
aacaaaatagatattaaagatctagaggtattaaaagaagaggcagctgacaaaaagttc
cccaataatgagctgctccagcgcctcagcaccgtcttcacggacatcgagaagtgcgag
agcagcagcacagaactcctcagcaacagccagagcagtagaataaccctgaaggagctg
aagactctggtggacaccatgcagaacctgccatgtgttataaagcagcaggaggaagtt
caggtaatattgcagaagattgaggagtttgattcccgtgctcaagttctggtcgacagc
accaagagtgagtggaagcaggactctcctcttcctgcagccactgaaatccgggctctg
ttggaggaaggagcgtcactgccggttattgccccagcatgtgagcttctgagtgggctg
ttggagcaggggcgctggctgggagaggtcaggcggacgttagggccagagggcagtgag
gtgactctgtctgtgctgaggaacttgatggagtcgggctgtaacgtaccacagagcgtg
tcggtggagactgcaatggctgaactgcaagagctgttgacaatagctgaacgctgggag
gagaaggcacagatatgcctggaggacaggcaaaaacaccatttatcaacgttggaggct
attgtgaatgaggctcagctaataccagtgcagcttcctaatatcctgtccctacaggcc
tgcttgagccgagctcgggcttgggttaccgatctagaggaaattcagaatggtgagcac
tacccatgtttggatgacctggagggtctggtagccattgggagggacctgccagtgaag
atggaggagctaaagcagctagagctgcaggtggccagtgctcactcctggagagagaag
gccagcaaaacctttctgaagaaaaacggccaacatagtctgctcgaggtgctctgccca
tgtgttgagaagagcaagaagatggaggacaactcaatggctacagaagcagattcggat
gtcaatgtattaggtctcacagctcaggacctccgagacccaggagctattgtgatggca
tttaaagaaggggagcgtctggagaaagaagccctccttcgcctccagcaggttaatttg
gcgaaacccagtatcgaaaatggagcaagcactgaccaggacagtatcaagacagaaaag
aaacagagtaactccatggagacagatacaccccttaactcagacagtcccatgttgcaa
aatggaggctcttcccattccctcacctctagccaaactgtgtgtgtttgcggtggccca
cctcgccccttgcttcaccggtgccatctgtgcaaagactggttccatggaggttgtgtg
tccttcccaccactgttggcctcctcagacacgcatcttgcaaagcccctctgctggtgg
gactggaacacacgtttcctctgtccacggtgccagcgatcccgacggccacggctggaa
accattctagcgctgctggtggcgctgcagaggttacctgtacggctgccagagggagaa
gctttacagtgtcttacagagagggccattaactggcagggcaaagccaaacaggcgtta
gacactccagaagtacagggggcactagaaagactgcaacaagtagaggatgaaatggtc
agtataaaagaggaagaaccagaggagaaaaagaaatggaatggagatactgtaattgtg
ctttctgactcggaggaagcagaagatggtgttatcgatctgacggaggatgggaactcg
ccaaaaaagagtgaaaagaacggcgttaatggtacacagtctggctgtgagaatggaatt
ggcagaaagttgagcacacgtgaagttacaggggtggagtctctgttgtcactagtgccg
agtcttaaagggccagtggtggagctgaacacatccgtcagagcacagctggaggagctt
cagcttgaaggagacctgctggaggtcacgcttgaccagacccacactatttaccgcatc
ctgcaggcagcatcacagccaccacaggacaccctgcggacactcatacagattgaactg
caggagcagagaagctcaggtcgtggcaacaagtcgaaagactccaagaggaagagaaag
agccagaaaaccgaaggcgagccgaaatccacagaggcttcagactgcaagaagacgaaa
gccctcaatcacagcccacctacagacacacacagagatgttgtgatgttttcctga

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