Danio aesculapii (panther danio): 130233430
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Entry
130233430 CDS
T11734
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
daes Danio aesculapii (panther danio)
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
daes03036
]
130233430 (smarcad1a)
Chromosome and associated proteins [BR:
daes03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130233430 (smarcad1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
ERCC3_RAD25_C
CUE
HHH_3
T2SSK
Motif
Other DBs
NCBI-GeneID:
130233430
NCBI-ProteinID:
XP_056319446
LinkDB
All DBs
Position
8:complement(24223684..24240866)
Genome browser
AA seq
974 aa
AA seq
DB search
MSFFNLDRFRFQRDNAVGIHRKSPDGSNSDKENQRAHQRKADGLGPSGKTSRQALEDVSS
DDEVIRMGKDSTSDLQHHINKDMEEKIIKLLEIFPQKSKKDLLEVIESTSTLDGAVAQCL
IIYGDEDSGGPKDKGGFGDDDDNNQPKKRRKIQRSDSSESEDEDSEDEESEEPSREKQEA
LLKKLKRKLPDIEKEVLRDVLKEHDWDYENALGSLLVFSSTDSSSPEDQKSKQKSKSSHS
KEKTDKITQKPCGSSSLSRWLTAGSSHVPEVSSMSALKTQKSAVSKSTSKNSSFKRKRSD
EMPLNDVSASEDEDEIDSDVDSMSDDQDSEEEDSISGTLQDKIIQFLQDASLDELALISG
CSIKKAQKIISLRPFNTWKDVKEQFFKDNGLSIDLVHGCKVVLKERQVVRDLMGRCEKIA
QKMTKDVTQVIEAGMGSIKQPKVLNSNLKLQAYQLIGLKWLILLHQHKLSGILADEMGLG
KTIQAIAFLAHLYEKGIKGPHLITVPSSTLDNWVRELGLWCPSLKVLIYYGSVEDRRNLR
QDILTGLIDFNIIVSTYNLTIGNDHDRSLFRRLKLKYAVFDEGHMLKNMNSLRYRHLMAI
NAEHRLLLTGTPLQNNLLELMSLLNFIMPSMFSSSTSQFSKMFSTRSSEEESSFHKDRIA
QARLIMKPFILRRVKSEVLKELPPKMEMIEMCPMSDAQHKLYDRLFKRLKKTPNGDKREL
CNVMMQLRKMANHPLLHRQYYTSDKLAAMSKAMLKEPTHYDADPALIQEDMEVMSDFELH
TLCKEYSSISGFQLEKALILDSGKFALLTKTLAKLKEKGDRVVLFSQFTMMLDIVEILLK
HLDHQYVRLDGSTPMAERIGLIDKYNTNPEIFVFLLSTRAGGQGINLASANTVILHDIDC
NPFNDKQAEDRCHRMGQSRTVQVIKLISKDSIEDCMLRVGQEKLKLEQDMTTDEGDDGAI
TEQMAELLKVSLGL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgagctttttcaacctggaccggttccgtttccaaagggacaacgcggtcggcattcac
cgtaaatcaccggacggctctaactcagacaaggagaatcagcgggctcaccaaagaaag
gcagatggtctgggtccatcaggcaagacatcaagacaagcactagaagatgtctcttca
gatgacgaagttatcaggatgggcaaggattcaacatcagatttgcagcaccatataaac
aaggacatggaggaaaaaatcatcaaactgttagagatattcccacagaagagcaagaaa
gatttactagaggtcatcgagagcaccagcaccctggatggagctgtagcacaatgtttg
ataatttatggagatgaagattcgggtgggcccaaagacaaagggggctttggtgatgat
gatgataataatcagccaaagaagaggagaaaaatccagcgttcagattcttcagagtct
gaagatgaagattctgaggatgaggagagcgaggagccaagcagagagaaacaggaggcc
ctcctaaagaagctaaaaaggaaactgcctgacattgaaaaagaggtcttaagggatgtc
cttaaagagcatgactgggactatgagaatgccttgggatcactgcttgtgttttcatca
acagattcaagttcaccagaagatcagaagtcaaaacaaaagtcaaaatcctcgcactct
aaggaaaaaactgacaaaatcacacaaaagccctgcggctcttctagtctgtctcgatgg
ctgacagcaggatcatctcatgtgcctgaagtgtcaagcatgtctgctttaaaaacacaa
aaatctgcagtcagcaaaagcacaagcaagaactcatcctttaaaaggaagaggagcgat
gaaatgccgctaaatgatgtcagtgcctctgaggatgaagatgagattgacagtgatgtt
gatagtatgtctgatgatcaggattcggaggaagaggacagcatctctggcactctccag
gacaaaatcattcagtttcttcaagatgcttcccttgatgagctcgccctgatatccggc
tgctcgatcaaaaaagcccagaagatcatttcactgaggcctttcaacacttggaaagat
gtgaaagagcagttctttaaggataatggcctgtctatagacctggtacatggctgcaaa
gtggtgcttaaggaaaggcaggtggttcgagacctcatgggaagatgtgaaaagattgca
cagaagatgaccaaagatgtcacccaggtcatagaagcaggcatgggctccatcaaacaa
cccaaagtcctgaacagcaatttaaaacttcaggcatatcagctaatcggcttgaagtgg
ctgattcttctacaccaacataagctgagtggcattctggcagatgaaatggggctgggt
aaaactattcaggccatcgctttcttggctcatttgtatgaaaaaggaatcaagggccct
catcttattaccgtaccctcatccacattggataactgggttcgtgagctgggtctttgg
tgtcccagtctcaaagttcttatttactatgggtctgtggaagaccgcagaaacttgcga
caagacattctcactggcttaattgatttcaacatcattgtatccacgtacaatctcaca
atagggaatgaccatgatcgcagtctcttccgtaggctaaagctgaaatatgcagtgttt
gatgagggccacatgcttaaaaacatgaactcgctacgctaccgccaccttatggccatc
aatgctgagcacagattgctacttaccggaactcctttacaaaacaacctgttggagcta
atgtccttgctgaacttcataatgccctccatgttctccagcagcacctcacagttctcc
aaaatgttctctacgaggtcctcagaagaggaaagcagttttcacaaggacagaatcgct
caggccagacttatcatgaagccatttatcttgagacgagtcaagagtgaggtgttgaaa
gaacttccaccaaaaatggaaatgattgaaatgtgtccaatgagtgatgcccagcataag
ctgtatgacagacttttcaaaagactcaagaagactccaaatggagacaagagggagctt
tgcaatgtgatgatgcagttgagaaagatggctaatcatccgttgctgcaccgacagtac
tatactagtgacaaattggctgccatgagtaaagccatgcttaaggagccaacacattat
gatgctgaccctgcattgatacaggaggacatggaagtgatgtctgattttgagctgcat
actttatgtaaggagtacagctcaattagtggatttcaactggagaaagcgctcatctta
gattctgggaagtttgcactgttaaccaagacgcttgccaagctcaaagaaaagggcgac
agggttgtgctctttagtcagttcaccatgatgctggacattgtggagattctgctcaaa
catcttgatcatcagtatgttcgcctggacggttctactcccatggcggagaggattggt
ctcattgacaaatacaatacaaatcctgaaatctttgtgttccttctgtcgacccgagct
ggaggtcagggaatcaaccttgcttcagccaacacagtgatactgcatgacattgactgc
aatccgttcaatgataagcaagcagaggaccgctgtcatcgaatggggcagtccagaaca
gtgcaggtgatcaagctcatcagcaaggactcgattgaagactgcatgcttcgtgtggga
caagagaagctgaaactagaacaggacatgaccactgatgaaggtgatgatggtgctatt
actgaacaaatggctgagctgctcaaagtctcactgggcctttga
DBGET
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