Danio aesculapii (panther danio): 130235511
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Entry
130235511 CDS
T11734
Symbol
shox
Name
(RefSeq) short stature homeobox protein
KO
K09331
short stature homeobox protein
Organism
daes Danio aesculapii (panther danio)
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
daes03000
]
130235511 (shox)
Transcription factors [BR:
daes03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
130235511 (shox)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
OAR
MRP-L20
Formyl_trans_C_2
CCDC53
AcrF31
Motif
Other DBs
NCBI-GeneID:
130235511
NCBI-ProteinID:
XP_056322074
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All DBs
Position
9:35621921..35630790
Genome browser
AA seq
304 aa
AA seq
DB search
MEELTAFVSKSFDQKTKESSKESITYREVLESGLARARELGNSETNLQEITETNNNHCPV
HLYKEHVELEKEKLKEFSVTRASDGIYDCKDKKEDVKSEDEDAQSKLKQRRSRTNFTLEQ
LNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTA
SHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVGTHSHPHLHPHLAAHAPYLMFPPPPFG
LPIASLADSASAAAAVVAAAKSNSKNSSIADLRLKAGLLGGHWLSPFQAQITAPGPYKNV
WMSV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactcacggcgttcgtgtcgaaatccttcgatcagaaaaccaaggagagcagc
aaagagagcatcacgtacagggaagttttggagagtggtttagcccgagccagagagctg
ggaaactcggagaccaaccttcaggagattactgaaacaaacaacaaccattgtccggta
catctttacaaggagcacgtagagctggaaaaggagaaattgaaggagtttagcgtgaca
cgggcttctgacggaatttatgactgcaaagacaagaaggaggatgtgaaatcagaggac
gaggacgcacagagtaaactgaagcagagacggagcaggacaaattttaccttagagcag
ctgaatgaactggagcgcttgtttgatgagacgcattacccggacgccttcatgcgggag
gagttgagtcagagactggggctgtctgaggcccgcgttcaggtatggtttcaaaacaga
agagcgaaatgccggaaacaggaaaatcaaatgcacaaaggcgttattctgggcaccgca
agccacctggacgcatgcagggtcgctccttacgtgaatatgggcgcactcagaatgcca
tttcaacaggtccaagctcagttgcagttggagggggtcggaacacactcccatcctcac
ctgcacccacacctcgcggcccacgctccctatctgatgttccctcctccgccctttgga
ttaccgatcgcgtcgctggcagactcggcctctgcagcggccgccgtggttgcggctgcc
aagagcaatagcaagaactccagcatcgctgacctgcgactcaaggcaggacttcttgga
ggccactggctcagccctttccaggcacagatcacagccccaggaccatacaaaaatgtc
tggatgtctgtctga
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