KEGG   Danio aesculapii (panther danio): 130236322
Entry
130236322         CDS       T11734                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
daes  Danio aesculapii (panther danio)
Pathway
daes03030  DNA replication
daes03410  Base excision repair
daes03420  Nucleotide excision repair
daes03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:daes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130236322 (rfc3)
   03410 Base excision repair
    130236322 (rfc3)
   03420 Nucleotide excision repair
    130236322 (rfc3)
   03430 Mismatch repair
    130236322 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:daes03032]
    130236322 (rfc3)
   03036 Chromosome and associated proteins [BR:daes03036]
    130236322 (rfc3)
   03400 DNA repair and recombination proteins [BR:daes03400]
    130236322 (rfc3)
DNA replication proteins [BR:daes03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    130236322 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    130236322 (rfc3)
Chromosome and associated proteins [BR:daes03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    130236322 (rfc3)
DNA repair and recombination proteins [BR:daes03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     130236322 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    130236322 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA_lid_RFC1 AAA AAA_22 nSTAND6 AAA_16 AAA_11 ABC_tran Sigma54_activ_2 AAA_5
Other DBs
NCBI-GeneID: 130236322
NCBI-ProteinID: XP_056322973
LinkDB
Position
10:complement(33875583..33883106)
AA seq 356 aa
MSLWVDKYRPTSLAKLDYHKEQANQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSITTPSKKKLEINTIASNYHLEVNPSDAGNSDRVVIQELIKTVAQSQQ
IQSSAQREFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLILCCNSTSKVIAPIRSRCL
AVRIPLPSVEEVCSVLSGVCRKEGLLLPPELAKQISEKSGRNLRKALLMCEACRVQQYPF
SPDQDIPETDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPEVIMKGLVTELL
SNCDGHLKAEVAQMAAYYEHRLQLGNKAIYHLEAFVAKFMAIYKKFMEDGLDNFMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagcttatgggtggacaaataccgaccgacgtccttggctaaactggactaccacaag
gagcaagcaaaccagctcaaaaatctggttcagtgtggtgattttccgcatttgttggta
tatggaccgtctggtgctggcaagaaaactcggatcatgtgtctgcttcgagagctttat
ggagccggggtcgagaaactaaggattgaacaccagtctatcacgactccatctaaaaag
aagcttgaaatcaacactattgccagcaactaccatctagaggtgaatccaagtgatgcc
gggaacagtgaccgcgtggtcattcaggagctgataaaaaccgtcgcccagtctcagcag
attcagtccagcgctcagagggagttcaaagtggtgctgctcacggaggtggaccgcctc
actaaagatgcccagcatgccttgcgccgtacgatggagaagtacatggccacttgtcga
ctgatcctctgctgtaactccacttcaaaagtgatcgcccccatcaggagcaggtgtctg
gctgtgaggatccctctgccaagtgtggaagaggtgtgcagtgttctgtcaggcgtgtgc
aggaaggagggtctgctgcttcctccagaactggccaaacagatatcagagaaatctggc
cgtaatctccgtaaggccctgctgatgtgcgaggcctgcagagttcaacagtatcccttc
tctccagaccaggacatcccggagacggactgggaggtttacctcagagagactgctaat
gctatagttagccagcaaagccctcagaggcttttggaagttcgggcacgattgtatgaa
cttctaactcactgcatcccacctgaagtcatcatgaagggtctggtgacggagctgttg
agtaattgtgatggacacctgaaggctgaagtggctcagatggcggcctactatgaacat
agactgcagctgggcaacaaagccatctaccacctggaggccttcgtcgctaaattcatg
gccatctacaagaagtttatggaagatggccttgacaactttatgttctga

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