Danio aesculapii (panther danio): 130236322
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Entry
130236322 CDS
T11734
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
daes Danio aesculapii (panther danio)
Pathway
daes03030
DNA replication
daes03410
Base excision repair
daes03420
Nucleotide excision repair
daes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130236322 (rfc3)
03410 Base excision repair
130236322 (rfc3)
03420 Nucleotide excision repair
130236322 (rfc3)
03430 Mismatch repair
130236322 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daes03032
]
130236322 (rfc3)
03036 Chromosome and associated proteins [BR:
daes03036
]
130236322 (rfc3)
03400 DNA repair and recombination proteins [BR:
daes03400
]
130236322 (rfc3)
DNA replication proteins [BR:
daes03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130236322 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
130236322 (rfc3)
Chromosome and associated proteins [BR:
daes03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130236322 (rfc3)
DNA repair and recombination proteins [BR:
daes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130236322 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
130236322 (rfc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
AAA
AAA_22
nSTAND6
AAA_16
AAA_11
ABC_tran
Sigma54_activ_2
AAA_5
Motif
Other DBs
NCBI-GeneID:
130236322
NCBI-ProteinID:
XP_056322973
LinkDB
All DBs
Position
10:complement(33875583..33883106)
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLAKLDYHKEQANQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSITTPSKKKLEINTIASNYHLEVNPSDAGNSDRVVIQELIKTVAQSQQ
IQSSAQREFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLILCCNSTSKVIAPIRSRCL
AVRIPLPSVEEVCSVLSGVCRKEGLLLPPELAKQISEKSGRNLRKALLMCEACRVQQYPF
SPDQDIPETDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPEVIMKGLVTELL
SNCDGHLKAEVAQMAAYYEHRLQLGNKAIYHLEAFVAKFMAIYKKFMEDGLDNFMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagcttatgggtggacaaataccgaccgacgtccttggctaaactggactaccacaag
gagcaagcaaaccagctcaaaaatctggttcagtgtggtgattttccgcatttgttggta
tatggaccgtctggtgctggcaagaaaactcggatcatgtgtctgcttcgagagctttat
ggagccggggtcgagaaactaaggattgaacaccagtctatcacgactccatctaaaaag
aagcttgaaatcaacactattgccagcaactaccatctagaggtgaatccaagtgatgcc
gggaacagtgaccgcgtggtcattcaggagctgataaaaaccgtcgcccagtctcagcag
attcagtccagcgctcagagggagttcaaagtggtgctgctcacggaggtggaccgcctc
actaaagatgcccagcatgccttgcgccgtacgatggagaagtacatggccacttgtcga
ctgatcctctgctgtaactccacttcaaaagtgatcgcccccatcaggagcaggtgtctg
gctgtgaggatccctctgccaagtgtggaagaggtgtgcagtgttctgtcaggcgtgtgc
aggaaggagggtctgctgcttcctccagaactggccaaacagatatcagagaaatctggc
cgtaatctccgtaaggccctgctgatgtgcgaggcctgcagagttcaacagtatcccttc
tctccagaccaggacatcccggagacggactgggaggtttacctcagagagactgctaat
gctatagttagccagcaaagccctcagaggcttttggaagttcgggcacgattgtatgaa
cttctaactcactgcatcccacctgaagtcatcatgaagggtctggtgacggagctgttg
agtaattgtgatggacacctgaaggctgaagtggctcagatggcggcctactatgaacat
agactgcagctgggcaacaaagccatctaccacctggaggccttcgtcgctaaattcatg
gccatctacaagaagtttatggaagatggccttgacaactttatgttctga
DBGET
integrated database retrieval system