Danio aesculapii (panther danio): 130236400
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Entry
130236400 CDS
T11734
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
daes Danio aesculapii (panther danio)
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daes03400
]
130236400 (smc5)
DNA repair and recombination proteins [BR:
daes03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
130236400 (smc5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_29
AAA_13
AAA_25
AAA_21
ABC_tran
Motif
Other DBs
NCBI-GeneID:
130236400
NCBI-ProteinID:
XP_056323069
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All DBs
Position
10:complement(9117522..9147746)
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AA seq
1073 aa
AA seq
DB search
MEQPQKRKRKSHEFSNSQPSDREPATSACANAREGDFVEGSIVRITMHNFLTYDHSEVFP
GPKLNMIVGANGTGKSSIVCAICLGLAGKTSVLGRGDKVGLYVKRGCHRGSVEIELYRTR
GNLIVTREIQVENNQSTWMLNKKHASQKAVEEAVRELHIQVGNLCQFLPQEKVGEFAKMS
NSELLEATEKSIGPPEMYEFHCELKTFRTKERDLENVCKEKGNFLEKARQRNERNKLDVE
RYYMKKRHLDRIQMLEKKKPWVEYETARKELEGVKKERDEMKRKLRSLKEAQEPLLRKIR
SVESELQPIEQQMKEMTTRIKEATQKCKQKHDQLELRNKEVDDIKQDFSLKQTEEADRQK
RIGHTQLMIRDLQKELQNMGTIEDVTPQIEAINAELRNIQEERARLESESLDLRRDKDEI
TGEFARLQNRLRSLDDMMKVKEEKLRSRFRDTHTALEWLRKNRDRYEGVVHEPMMLVINV
RDARHAKYIETHISVNDLRAFVFQRQEDNDKFMNEMRDTQRLRVNSIIAPTESCSKRPPS
RPIETLKPYGFISYLREMFDAPEEVMSYLCHQYRVNDVPIGTEKTKGMIETVIKDLQLRT
IYTAEERYNVKKSAYSNNVVSSNSALRPPQYLTTTIDVEERRQLEEQLRAAERQKQSIDQ
RMAAIREQQANLDRRDNELRANKKKLSDLKSKKRQLEQKISTKQDSLRQMEQNEINLVAI
EEEANAKIAAVNNKKVTIMGEYLSHLQSKARLNMEKVYLALQSAGLSAEKTKLETDVRDS
SAELKRAEVDYTKLDKIKTNLLMTCKTLMKRASEICNMTPGETAVPEELHAAFSLLPETL
DEIDAMLNEERTRAECFTGLSDAVVDEYNRRELEIKNLEKELDDKTNELTTYRRNIAEAK
ERWLNPLKKLVEQINVRFSDFFQSMQCAGEVDLHSENEEEYDKYGIRIQVQFRRNTRMHE
LTPHHQSGGERSVTTMLYLMSLQELNRCPFRVVDEINQGMDPVNERRVFDIVVRAACGVN
TSQYFFITPKLLQNLQYAEQMTILCVHNGPQMLPPNKWNEKAFIQRARRRNLT
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggagcagccgcagaagagaaagcgaaaaagccacgaattttccaactcacagccctcc
gaccgtgaacctgcaacgtctgcctgtgcaaatgcccgagaaggagatttcgtggagggc
tcaatcgtccgcatcaccatgcataacttcctcacgtacgatcactctgaagttttcccc
ggacccaaactgaacatgatcgttggagccaatggcacagggaagtccagtatcgtgtgt
gccatctgtctgggtctggctgggaaaacatctgtcctgggccgaggagacaaggttggt
ctgtatgtgaagagagggtgtcatagaggctcagttgaaattgagctatacaggacacgt
ggaaacttgatagtcaccagagagatccaggttgagaacaatcagtcgacatggatgctg
aataaaaaacatgccagtcagaaggcagttgaggaggctgtgagagaactgcacattcag
gttgggaacttgtgtcagttcctaccacaggaaaaggtcggcgagttcgctaaaatgagt
aatagtgaacttcttgaagccactgagaaatctattggcccaccagaaatgtatgaattt
cactgtgagctcaagacgtttcgcaccaaagagagagatttggagaatgtatgtaaggaa
aaaggaaacttcttagagaaggccagacagaggaatgagagaaacaagctggatgtggag
cgctactacatgaagaagaggcacttagacaggatccagatgcttgagaagaagaaaccc
tgggtggagtatgaaacggcacgtaaagagctggagggggtgaagaaggaaagagatgaa
atgaaaaggaagctgaggtccctgaaagaagctcaggagccgctgctcagaaagatccgc
tctgtggagagtgaactgcagcccatcgagcagcagatgaaggagatgaccacccgtatc
aaagaggcaacgcagaaatgtaagcagaaacacgaccagcttgaactgaggaataaagag
gttgatgacatcaaacaggactttagtctgaagcagacggaggaggcagacaggcagaag
cggattggacacacacagctgatgatcagggatctgcagaaggagcttcagaatatgggc
acaattgaggatgttactcctcagattgaggctatcaatgcagagctgaggaacattcag
gaagaaagagccagactggagagtgagagtctagacctgcgcagagataaagacgaaatc
actggagaatttgcgcgtttgcagaatcgtctgaggagtctggatgacatgatgaaggtg
aaagaggagaaattgcgcagccgctttcgtgacacacacacagccctcgagtggctgagg
aaaaaccgtgatcgttatgaaggagttgtccatgagcccatgatgctggtgataaatgtt
cgtgatgctcgccatgcaaaatacattgagactcatatttctgtcaatgacttgagagct
ttcgtcttccagagacaggaggataacgacaaatttatgaatgagatgagagatacgcag
aggctgcgagttaacagcatcatcgctccaacagagtcttgctctaaacgaccaccgtca
cgacccatcgagaccctcaagccttacggcttcatctcgtacttgcgagagatgtttgat
gctcctgaggaggttatgagttatttatgccatcagtacagagttaatgatgtaccaata
ggaacagagaagaccaagggcatgattgaaacggtgatcaaagaccttcagttgagaacg
atctacacagcggaggagaggtataatgtgaagaagtctgcttactccaataatgtggtc
tccagtaactcggctctgcgaccaccacagtacctgactacaaccatagatgtagaggag
agacgacagctggaggagcagctaagggcagcagaaaggcagaagcagagcattgatcag
cggatggcagccattcgggagcaacaagctaacctggaccgtcgcgataatgagctacgt
gctaataagaagaaactgtctgatctgaaaagcaagaagagacagctggagcagaaaatc
agcacaaagcaggacagcttgaggcagatggagcagaatgagatcaacttggtggcaatc
gaggaggaagcaaatgccaagattgctgctgtcaacaacaaaaaagtgaccataatgggg
gagtatttgagtcacctgcagtcaaaggccaggctaaatatggagaaggtgtatttggct
ctccagagtgcaggtctcagtgctgagaaaaccaaactggagacagacgttcgagacagt
tcagctgaactcaagagagcagaggtagactataccaagttggacaagataaagaccaat
ctgttgatgacgtgtaagaccctgatgaaacgggccagtgagatctgtaacatgactcca
ggagagacagccgtcccggaggaactacatgcagccttcagcctgttgcctgaaactctg
gatgagatcgatgccatgctaaatgaggagagaaccagagctgagtgtttcacaggcctc
agtgatgctgtggtggacgaatataacagacgtgagctggagataaagaacttggagaag
gagctggacgataagactaatgaactgacaacctatagaagaaacattgcagaggctaaa
gagcgctggctgaatcccctgaagaagctggtggagcagatcaatgtgcgcttcagtgat
ttctttcagtctatgcagtgtgcgggagaggtggatctgcactcagagaatgaggaggag
tacgataaatatggcattcgcatccaggtgcagttccgcaggaacacgcggatgcacgag
ctcacgccacaccatcagagcggaggagagcgcagcgtcaccaccatgctctacctcatg
tccctgcaggagctcaaccgctgccccttcagagtggtggacgagatcaaccagggaatg
gatcctgtcaacgagagacgtgtgtttgacattgttgtgagggcggcctgcggtgtgaac
acgtctcagtatttcttcatcacacctaagcttctccagaacctgcagtacgcggagcag
atgaccatcctctgtgtgcacaacggccctcaaatgctgccgccaaacaagtggaacgaa
aaggctttcatccagcgagccagacgcagaaacctaacctga
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