Danio aesculapii (panther danio): 130236491
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Entry
130236491 CDS
T11734
Symbol
msi2a
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog 2a
KO
K14411
RNA-binding protein Musashi
Organism
daes Danio aesculapii (panther danio)
Pathway
daes03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130236491 (msi2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daes03019
]
130236491 (msi2a)
Messenger RNA biogenesis [BR:
daes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130236491 (msi2a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
CSD
RRM_11
TASOR_alpha-beta
Motif
Other DBs
NCBI-GeneID:
130236491
NCBI-ProteinID:
XP_056323186
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Position
10:37210924..37547469
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AA seq
407 aa
AA seq
DB search
MEADASQVTSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKR
SRGFGFITFADVSSVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAS
TVVEDVKQYFEQFGKVEDACXCLIKTTNRHRGFGFVTFENEDIVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARSLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFSPSYSYQ
FPGFPATAYGPVAAAAVAAARGSGRATRGRSGYMAYPQNAGPGFPDYGFYSGPGDQRAAP
CSFADYATLGPHTGQMLQSEHVTSTCNSPSQHHPSPDHFKSSGANPPRPGGFPGANSPGP
VADLYGPSSQDSAVGNYISAASPQPGSGFNHSIAGPLIATAFTNGYH
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggacgcgagtcaagtcacctctggaagcctgaacgattcgcaacacgacccg
ggtaaaatgtttatcggtggactcagctggcaaacctcaccagacagccttagggactat
ttctgcaaattcggggagatcagagaatgtatggtgatgcgcgaccccaccaccaaacgc
tccagagggtttggcttcatcacgtttgcagatgtttccagtgtagataaagtcttagct
caaccacaccacgaattagactccaagacgattgatcctaaggtcgcctttcctcgacgt
gctcaacccaagatggtcacaagaacaaagaaaatatttgtgggtggattatcagcgagc
acagtggtcgaagacgtgaagcagtactttgaacagttcgggaaggtagaggacgcatgc
taatgtttgataaaaactacaaacagacatagaggcttcggcttcgtaacgtttgagaat
gaagacattgtagagaaagtctgtgaaattcattttcacgaaatcaataataaaatggta
gaatgtaagaaggctcaaccaaaggaggtgatgtttcctccaggcacgagggggagggcg
agaagtcttccctacactatggacgccttcatgctgggcatgggcatgttgagttatcca
aacattgtggcaacgtacggtcgtggatacacaggattctctcctagctacagttaccag
tttccaggttttccagcgacggcgtacggaccggtggcggcagcggcagtggcagcagca
cgaggctcaggtagggcaacccggggaagaagcggctacatggcgtatccacagaacgca
gggccagggtttccagattatggcttttactctgggcctggagaccagcgagccgccccc
tgctcctttgccgattatgccaccctgggaccccatacgggtcagatgctgcagagcgag
cacgtcacctccacctgcaactctccatcccagcaccacccaagcccggaccactttaaa
agctcaggtgctaaccctcctcggcctggaggtttccccggtgcgaacagtcctggcccc
gtggcagacctgtatggccccagcagtcaggactcagcagtgggaaattacatcagcgct
gccagtcctcagccaggctctgggttcaatcacagtatcgcgggtcctttgattgccaca
gcatttacaaatgggtaccactga
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