Danio aesculapii (panther danio): 130236929
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Entry
130236929 CDS
T11734
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
daes Danio aesculapii (panther danio)
Pathway
daes04517
IgSF CAM signaling
daes04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130236929 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130236929 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
daes04812
]
130236929 (sptbn1)
Cytoskeleton proteins [BR:
daes04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130236929 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
130236929 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
PMC2NT
SOS1_NGEF_PH
PH_13
SCAR_helical
Motif
Other DBs
NCBI-GeneID:
130236929
NCBI-ProteinID:
XP_056323657
LinkDB
All DBs
Position
11:complement(44043609..44235900)
Genome browser
AA seq
2350 aa
AA seq
DB search
MTTVAAEFEHMDIQQQYQDSVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAV
VAVARELETENYHDIKRIAARKDNVLRLWEYLLELLKARRQRLEMNLSLQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNKNAQRFAVDEEGY
KPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDCGKDLTGAVRLLSQHRALEDEMSGRSGHLQHTVREGQAMADAGHFGEAKIRERIAD
VQAQWAALEQLASVRKTRLEEACSLHQFQADADDVDTWTLDALRIVSTADVGHDEFSTQA
LVKKHKDASTEVASYRPVIDALHEQAQTLPPEQAKSANVTERLAGIEERYKEVSELTRLR
KQALQDALALYKMFSEADACELWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLIHSGHPSEKDIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYH
LDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEADR
LAGEHPDQAKAITGRLAEITSVWEEMKETLRTREESLGEASKLQQFLRELDDFQSWLSRT
QTAIASEDMPNTLAEAEKLLAQHEGIKNEINNYEEDYQKMRDMGEMVTQDQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQIFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEDKINGVVEAGRRLASDGNINADRIQERAASIDDRHKKNR
EAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELQSNKEWLDKIEKEGKQLVSEKPETEAVVKEKLAALQKMWTELETTTQTKAQCLFDANK
AELFTQSCADLDKWLVGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVEELQS
QAHVLRQEGKDTDEVDGRRKVVEQKFQELLDPLLKRKNFLMASREIHQFNRDVEDEILWV
EERMPLATSTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRCDDIFERSQSILKADSPNVEA
IRARLSDLQGLWSLIMQETEKRHSRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVAANHPESERIGMRQSQVDKLYAG
LKDLSEERRGKLEERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDGVNRMADELINAGHTDAATVAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVHQ
LQEDAVRLQSAYAGDKADDIQRREGEVLEAWRSLLEACEGRRSRLLDTGDKFRFFSMVRD
LMLWMEDVIRLIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKH
YASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
RELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRLQEEEERRRKPPS
PDPVQAQDGETQQREGEQIAQNGLPSDQDSPRDGVDGEMNGVAERSSKEPSPIPSPGADR
RGKGSQSATLPTKGQETPSAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNHEMGFYK
DNKNAGQGIPYHNEIPISLKEAVCEVAVDYKKKKHVFKLRVTDGNEYLFQAKDDEEMNTW
IQAIQNAGSGSSSSEKSETAPSNQSTPASSRAHTLPATVSMTSESSPGKRDKDKEKDKEK
RFSLFSKKKQ
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcagagttcgagcacatggacatccagcagcagtaccaggacagt
gtgaacaaccgctgggacgacgagtgggacaatgagaacagctccgcacgactgttcgag
cgctcgcgcatcaaagcactcgcagatgagcgtgaggccgtgcagaagaaaaccttcact
aaatgggtgaactctcacctagcccgcgtgtcctgtcggatcaccgatctctacatggac
ctgagggacggacggatgctcatcaaactgctagaggtcctgtctggagagagactgccg
aagccgacgaagggccgcatgcggatccactgtctggagaatgtggataaagccctgcag
ttcctcaaggagcagcgtgtgcatctggagaacatgggatcacatgatatcgtcgacggc
aatcaccgactcacgctcggactcatctggaccatcatcctccgcttccagatccaagac
atcagcgttgagacagaagacaacaaagagaaacgctcagccaaggacgccctgcttctg
tggtgccagatgaagaccgcaggctatcccaacgtcaacatccacaacttcaccaccagc
tggcgtgatggaatggctttcaatgccctcattcacaaacacaggccagacctgattgac
tttgacaaactgaagaagtccaacgctcactataacctgcagaacgccttcaatctggcc
gaacagcatctgggactcaccaaactgctggatcctgaagatatcagcgtagaccatccc
gatgagaagtctgtcatcacttatgtcgtcacatactaccattatttctccaagatgaag
gccttgaaggtggagggaaaacgaatcggaaaggtgctcgacaatgccatcgaaactgag
aaaatgatcgagaaatacgagtctctggcgtctgatctgctggagtggattgaacagacc
atcatcatcctcaacaaccgcaagtttgcaaactctctggttggagtccagcagcagctt
caggccttcaacacctacaggaccgtagagaaaccacccaaattcactgagaagggaaac
ctggaggtgcttctgtttactatccagagcaagatgagggccaataaccagaaggtctac
atgccacgagagggaaaactcatctcagacatcaacaaggcgtgggagcgtctggagaaa
gccgaacacgagcgagagctggcgctgaggactgaactcatccgacaggagaagctggag
cagctcgccagacgcttcgaccgtaaggcagcaatgagagaaacctggctgagcgaaaac
cagcggctcgtttcacaggataatttcggattcgacctccaggcggtcgaggcagcaacc
aaaaaacatgaagccattgagactgatatagcagcgtatgaggagcgagtgcaggcagtg
gtggccgtggcccgagagctggagactgaaaactatcacgatatcaagcgaatcgccgcg
cgcaaagacaacgtgctgcggctgtgggagtatctgctggagctgctgaaggcccgaaga
cagaggctggagatgaacctcagtctgcagcgcgtcttccaggagatgctctacatcatg
gactggatggacgagatgaagatgctgctgttgtctcaggattatgggaagcatttgctg
ggagttgaagatctgctgcagaaacacgctctggtagaggctgatatcggcattcaggcc
gaccgtgtcaaagcagtcaacaaaaacgcacagagatttgctgtggatgaggagggctac
aaaccgtgtgatcctcaggtcatccgcgaccgtgtggcccacatggagttctgctatcag
gaactgacacagctcgcagccgaacgccgcgctcgtctagaagagtcgcgccgcctctgg
aagttcttctgggagatggcagaagaagagggctggattcgagaaaaagagcagatatta
tcctctgacgactgcgggaaggatctaaccggcgccgtgcggcttttaagccaacatcgc
gcactggaagacgaaatgagcggccgttctggacacctccagcacactgtacgcgaaggc
caagccatggctgatgctggtcacttcggtgaagctaaaatccgtgagcgcatcgctgac
gtccaagcgcagtgggcggctctagaacagcttgcatctgtaagaaaaacccgtttggaa
gaagcctgtagccttcatcaattccaagctgatgctgatgacgtcgatacgtggacgtta
gatgctcttcgaatcgtgtccaccgctgacgtcggccatgatgagttttcaacccaagct
ttggtcaagaaacataaagacgcatcaaccgaagtggctagctatcgtccagtgatcgac
gctcttcatgaacaggcccagactcttcctcctgagcaggcgaagagtgctaacgttact
gagcggctggcgggcatcgaggagcgctataaagaggtttcggagttgaccaggctgagg
aagcaggctttgcaggacgccctggcgctctataagatgttcagcgaggcagacgcgtgc
gagctctggattgatgagaaagagcagtggttgaacagcatggagatcccagagaaactg
gaggacctggaggtcattcagcacaggtttgaaagtctggagcctgaaatgaataaccag
gcctcacgtgtggctgtggtcaaccagatcgccaggcagctgatccacagcggacacccc
agcgagaaggacataaaggcccaacaagacaaactcaacaccaggtggagtcagttccgt
gatctggtggaccagaagaaagagtccctgaactccgctttgggagtccagaactaccac
ctcgactgtaacgagaccaaatcctggatccgtgagaaaacaaaagtcatcgagtccaca
caagagctaggaaatgacctgacaggagtgatggctctacagcgcaaactcaccggcatg
gagcgagatctggctgccatcgaagccaaactaggagacctccgtggagaggcagatcga
ttagctggagaacatcccgaccaggctaaagccatcacggggcggctagcagaaatcacc
tccgtttgggaggagatgaaggaaaccctccgaacccgtgaggagtctcttggcgaagcc
agcaaactccagcagttcctccgagagctggacgacttccagtcttggctttcccgcaca
cagacggctatcgcttctgaagacatgcccaacacattagccgaagcggagaagctgcta
gcccaacacgaaggcatcaagaacgagattaacaactatgaagaggactaccagaagatg
cgggatatgggcgagatggtgacgcaggaccagacggacgcacagtacatgttcctgagg
cagaggctccaggcgctggacactggctggaacgagctgcacaagatgtgggagaaccgg
cagaacctgctgtctcagtctcacgcctaccagatcttccttagagacaccaaacaagca
gaggccttcctcaacaatcaggagtatgttctggcccacaccgagatgcccaccaccctt
gaaggagccgaagctgccattaagaaacaggaggatttcatgaccactatggacgccaat
gaggacaagatcaacggtgtggtggaggccggcaggaggctggccagtgatggaaacatt
aacgctgaccgcattcaagaaagagcagcttctattgatgaccggcataagaagaatcgt
gaggctgcagtggagctgctcatgagactaaaggacaacagagacctgcagaagttcctg
caggactgccaggagctgtcgctgtggatcaatgagaagatgttgacggcacaggacatg
tcctacgatgaagctcgaaacctacacagcaaatggctcaaacaccaagcattcatggct
gaactgcagtcaaacaaagaatggctggacaaaatcgagaaggaagggaagcagctggtc
tcggagaagccggagacagaagcagtggtgaaggagaagctggcggcgctgcagaagatg
tggactgaactggaaaccaccactcagactaaagcccagtgtctgtttgacgctaataaa
gccgagctgttcacgcagagctgcgccgacctggacaagtggctcgtgggtctcgagggt
cagatccagtctgatgattacggcaaagatctgaccagcgtcaacatcctgctcaaaaaa
caacagatgttggagaatcaggtggaggtgcgtcagagggaggtggaggagctgcagtct
caggctcatgtgctccggcaggagggaaaagacacggatgaagtcgacggacgcaggaaa
gtggtggagcagaagttccaggagctgctggacccgctgctgaagaggaaaaacttcctc
atggcctctcgtgagatccaccagtttaaccgtgacgtggaggacgagatcctctgggtt
gaagagaggatgcctcttgctacgtcaacagatcatggcaacaatttacagactgttcag
ctattaatcaagaaaaaccagacactgcagaaggagatccagggccatcagccacgctgc
gatgatatattcgagcgcagccagagcatcctgaaggccgacagccccaatgtggaggcg
atccgggcccgtctgtcagacctgcagggcctctggagcctcatcatgcaggagacggag
aaacgccacagcagactggaggaagcccataaagcacagcagtattactttgatgccgct
gaagccgaagcctggatgagtgaacaggagctttacatgatgtctgaagagaaggccaag
gatgagcagagttcagtggccatgctgaagaaacaccagatcttggagcaggcggttgag
gattacgctgaaactgtgcaccaactgtctaagaccagccgaggcctggtggccgcaaac
caccctgagagtgagaggatcggcatgcgtcagtctcaggtggataaactgtacgctgga
ctgaaggatctgtcggaggagcggagagggaaactggaggagcgtttccgactcttccag
ctgaaccgcgaggtggacgatctggagcagtggatcgcggagcgggaggtagtggctgga
tctcacgagctcggacaggactacgaacacgtcactatgttgcaggagcgtttccgtgag
tttgctcgcgacactggaaacatcggtcaggagcgtgtggatggagtgaaccgcatggcg
gacgaactgatcaacgccggtcacacagacgccgcgaccgtagcagagtggaaggacggt
ctgaacgaggcctgggcggatctgctggagctcatcgacacgcgaacccagatcctcgcc
gcatcctatgagctgcacaaattctaccacgacgccaaggagattctgggacgcatcctg
gacaaacacaagaagcttcctgaagagctgggccgggaccagaacacggtggagacgctg
cagaggatgcacaccacgtttgagcacgacattcaggctctggggacgcaggtgcatcag
ctgcaggaggatgcggtgcgtctgcagtcggcgtatgcgggcgataaagccgacgacatc
cagcggcgtgagggcgaggtgctggaggcctggaggagtctgctggaggcctgcgagggc
cggcgctctcgcctgctggacactggagacaagttccgcttcttcagcatggtgagagac
ctgatgctgtggatggaggacgtcatccgcctcattgagacgcaggagaagcccagggac
gtgtcgtctgtggagcttctcatgaacaaccaccagggaatcaaggctgagatcgacgcc
cgtaatgacagtttcacagcctgcattgagctgggcaaatctctgctggcacgcaaacac
tatgcatcagaggagataaaagagaagttgctgcagttgacggacaagaggaaagatatg
attgacaagtgggaggacagatgggagtggctgagactgattctggaagtgcaccagttt
tctagggacgcgggcgtggcggaggcgtggctgctgggtcaggagccttatctgtccagc
agagagttgggtcagagtgtggacgaggtggagaagctgatcaagcggcacgaggccttc
gagaaatcagccgcgacctgggaggagcgattctctgcactcgagagactgactacgttg
gagttattggaagtgagaagactgcaagaggaggaagagaggaggaggaaaccaccgtca
ccagaccctgttcaggcacaggacggagaaacacagcagagagaaggagagcagattgcc
cagaacggactaccatcagaccaggactctccacgggatggagtggatggagagatgaac
ggtgtggctgagaggagctcgaaggagccgagtcccattccgtctccgggtgcagacaga
cgggggaaagggagtcagtcggccacactgccgactaaaggacaggagacaccgtcagct
cagctggagggattcctgcaccgcaaacatgagtgggagggacacaacaagaaggcctcc
agcagatcctggcataatgtgtactgcgtgatcaataaccacgagatgggcttctacaag
gacaataagaatgcaggtcagggtatcccgtaccacaacgagatccctatcagcctgaag
gaggccgtgtgtgaggtcgcggtcgactataagaagaagaaacacgtcttcaagctccga
gttactgatggaaatgagtatctcttccaagccaaagatgatgaggagatgaacacatgg
attcaggccatccagaacgccggcagcggctcgtcgtcctctgagaaatctgagacggcg
ccgagtaaccagagcacaccggcgtccagccgtgctcacacactcccggccaccgtcagc
atgaccagcgagtccagccccggcaaacgagacaaagacaaggagaaggacaaggagaag
cgcttcagtctcttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
