Danio aesculapii (panther danio): 130237668
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Entry
130237668 CDS
T11734
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
daes Danio aesculapii (panther danio)
Pathway
daes03030
DNA replication
daes03410
Base excision repair
daes03420
Nucleotide excision repair
daes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130237668 (rfc4)
03410 Base excision repair
130237668 (rfc4)
03420 Nucleotide excision repair
130237668 (rfc4)
03430 Mismatch repair
130237668 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daes03032
]
130237668 (rfc4)
03036 Chromosome and associated proteins [BR:
daes03036
]
130237668 (rfc4)
03400 DNA repair and recombination proteins [BR:
daes03400
]
130237668 (rfc4)
DNA replication proteins [BR:
daes03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130237668 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
130237668 (rfc4)
Chromosome and associated proteins [BR:
daes03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130237668 (rfc4)
DNA repair and recombination proteins [BR:
daes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130237668 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
130237668 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
RCF1-5-like_lid
AAA_16
AAA_22
AAA_30
AAA_assoc_2
AAA_11
SLFN-g3_helicase
Mg_chelatase
AAA_14
DUF815
AAA_5
AAA_24
RuvB_N
AAA_19
AAA_28
Kinesin
ResIII
ATPase_2
AAA_7
Motif
Other DBs
NCBI-GeneID:
130237668
NCBI-ProteinID:
XP_056324655
LinkDB
All DBs
Position
11:complement(46611481..46625606)
Genome browser
AA seq
358 aa
AA seq
DB search
MQAFLKGSSSQSVKAQKPSSSSSSAGEKKQRAVPWVEKYRPKCVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPDLYRQRVLELNASDERGIQVVREKVKR
FAQLTVAGTRPDGKACPPFKIIILDEADSMTNAAQAALRRTMEKESRTTRFCLICNYVSR
IIEPLTSRCSKFRFKPLANKIQQERILEICRKENLKYTTEGVDALVRVSEGDLRKAITFL
QSGARLNAEREITEQTIIEIAGVVPPKLIQSLLHICFNGTFEKLEVAVKDMIDQGYAATN
LLNQLHDIIIEERLSDKQKSVITEKMAEVDKCLADGADEYLQLLSLCSVIMQQATQNN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttctgaaaggctcatcctcacagagtgttaaagctcagaagccttcatca
tcatcatcctcagccggagagaagaagcagagagcagtgccatgggtggagaaatacagg
cccaagtgtgtggatgaagtggcgtttcaggaggaggtggtggcggtgctgaagaagtct
ctggaaggagcagatctgccgaatctgctgttttatgggcctccaggaacaggaaagacc
tccaccatcctcgctgcagccagagagctttatgggccggatctgtaccgtcagcgagtg
ctggagctgaatgcgtctgatgagcgcgggattcaggtggtccgagagaaggtgaagcgc
ttcgctcagctgaccgtggccggcacacgaccagatggtaaggcctgtccaccgtttaag
atcatcatcctggacgaggcggactctatgaccaacgctgcgcaggcagctctgcggcgc
accatggagaaggagtcgcgcaccacacgcttctgcctcatctgtaactacgtcagccgg
atcatcgagccgctgacctccaggtgctcaaagttccgcttcaaacctctggccaacaag
atccagcaggagagaatactggagatctgcaggaaagagaacctcaagtacaccactgag
ggtgtggacgctctggtgcgtgtgtcagaaggagacctccgcaaggccatcactttcctg
cagagcggcgccagactcaacgctgagcgggaaatcacagagcagaccatcatagagatc
gccggggtggttcctcctaaattgatccagtctctcctccacatctgctttaatggcacg
tttgagaagctggaggtcgcagtgaaggacatgattgatcagggatacgctgctactaat
ctcctcaaccagctgcacgacatcatcattgaggaacggctgagcgataagcagaagtcc
gtcatcactgagaagatggccgaggtggacaagtgtctggcagatggagcagacgagtat
ctgcagctgctgagtctctgctcggtcatcatgcagcaggccacacagaacaactaa
DBGET
integrated database retrieval system
