Danio aesculapii (panther danio): 130239668
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Entry
130239668 CDS
T11734
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
daes Danio aesculapii (panther danio)
Pathway
daes04137
Mitophagy - animal
daes04140
Autophagy - animal
daes04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130239668 (hif1aa)
04137 Mitophagy - animal
130239668 (hif1aa)
04148 Efferocytosis
130239668 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
daes03000
]
130239668 (hif1aa)
Transcription factors [BR:
daes03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130239668 (hif1aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
WASH-7_C
Motif
Other DBs
NCBI-GeneID:
130239668
NCBI-ProteinID:
XP_056326939
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All DBs
Position
13:complement(21634773..21660864)
Genome browser
AA seq
709 aa
AA seq
DB search
MEAVAPGKKRVSSERRKEKSRDAARCRRGKESEVFYELSRELPLPHSVTSNLDKASVMRL
ALSYLRLRKLLNSDVLEKETALDTQWNGSFLKALDGFLLVLSADGDIVYLSENVSKCLGL
PQIELTGHSVFEFTHPCDHEELREMLAHRFGLSKKSKDQNTNRSFLLRMKCTLTSRGRTV
NVKSASWKVLRCSGRIHTADGVEKEVCEEKNTCSTYLVLICESIPHPANIEAPLDSRTFL
SRHTLDMRFTYCDERISELLGFDPVDVLQHSVYEYYHALDSDHMTKTHHNLFVKGQVCTG
QYRLLAKAGGFVWAETQATVIYNSKNSQAQCVVCVNYILSGIEQPKQILSLQQTNSTKIK
QEEHQEEVEVTMAELKEKEKEMDKEDEECVQPVVQHNSLKGETEALTVADPVLTLDINIT
EIPLYNDVMLPSSDVLLPLSPLSPPCSSLNDDEASTGHLQNDQFPFPQSSDSSRSQVDLP
VDSVLCDQLKPHHVEKHFSMDIESKTQGVGLDLEMLAPYIPMDDDFQLRTVSPVRSMCSS
PCSGLDLTPSSSTQTSPALSAATPDSLSCDPVQQKNKTTEQERSREIIQDSDISYKCQTN
PKLLKRKLETIPLSEAIRLGSVLQVVTDFPEKKVRKTDVPSSEGIRHTTILLLPSNVASR
LLSRSSEGGAIAMPLPQITHHDCEVNAPVIGRQHLLQGEELLCALDIVI
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtcgcacctgggaaaaaaagggtgagttctgagcgaaggaaggagaaatcc
agagacgcagcacgttgtcggagaggaaaagagtctgaggtgttttatgagctgtccaga
gaactccctctcccccacagcgtcacctctaacctggataaagcgtcggtcatgagactg
gctctcagttacctgcgcctgcgtaaactgctgaacagcgatgtgctggagaaggagact
gcattagacactcagtggaacggttcatttctaaaagctctggacgggtttcttttggtt
ctttcggctgatggcgacattgtctacctgtcagagaatgtcagcaagtgtttgggcctt
cctcagattgaactcaccggtcacagtgtgtttgagttcactcatccgtgtgaccatgag
gagctcagagaaatgctggcacacagatttggtctgtctaaaaaatcgaaagatcaaaac
acaaacagaagttttctgctgaggatgaaatgcacactgaccagcagaggacgcactgtc
aatgttaaatctgcctcctggaaggtgctgcgctgttcgggccgtatccacacagcagat
ggtgttgagaaggaggtgtgtgaagaaaaaaacacgtgttcgacgtacctggtgctcatc
tgcgagtctattccccatccagcgaacattgaagctcctctggattccagaacgttcctc
agccgccacactttagacatgcgcttcacctactgtgatgagaggatctcagagctcttg
ggttttgatccagtggatgtgttacagcattcagtgtatgaatactatcacgcgctggat
tcagaccacatgaccaaaacccaccacaacctttttgtgaaggggcaagtgtgtactgga
cagtaccgtctgctggctaaagcaggagggtttgtttgggcagagactcaggccactgtg
atctataacagtaaaaactctcaggcacagtgtgtggtttgtgtcaactacatcctcagt
ggcattgaacagcccaaacaaatcctgtcgcttcagcaaacaaacagcacaaaaataaaa
caggaagaacaccaggaggaggttgaggtgaccatggcagagttgaaagagaaggaaaag
gagatggacaaggaagatgaggagtgtgtgcagcctgtagtgcaacataacagcctgaag
ggggagacagaggcgctgactgtagcagatcctgttctcacactggatatcaacatcact
gaaattcctctctacaacgatgtcatgttgccctcttcagatgtcctgctccccctctcg
cccctgtctcctccgtgctcctctctaaatgacgatgaagcctccaccggccatctacaa
aatgaccaattccctttcccacaatcctctgactcctccagatcacaggttgatctcccg
gtggattcagtattgtgtgaccagctaaaaccacatcacgtggagaaacacttttccatg
gatatagagtccaagacacagggagttggtttggatctggagatgttggctccatacatt
cccatggatgatgacttccagctgcggactgtttctccagtcaggtccatgtgctccagt
ccgtgttcaggacttgatctgaccccgtccagcagcacacaaaccagcccagctctttcg
gcagccactccagactcactatcctgtgaccccgtgcagcagaaaaacaaaaccacagag
caggagcgcagcagagaaattattcaagacagtgatatttcttataaatgtcagaccaac
ccaaagctactcaagaggaaactcgagaccataccgctgtctgaagcaataaggctgggg
tctgtgctgcaggttgttactgattttccagagaaaaaggtccgcaaaacagatgttcca
tcatcagaaggaattcgtcacactacgatactgttgctgccatccaatgttgcgagtcgg
ttattgagcagatcgtcagagggcggagccatagctatgcccctcccccaaatcacccat
cacgactgtgaggttaatgcacctgtaattggacgacagcacctgctgcagggggaggag
cttctgtgtgccttggatatagttatttaa
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