Danio aesculapii (panther danio): 130240393
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Entry
130240393 CDS
T11734
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
daes Danio aesculapii (panther danio)
Pathway
daes04010
MAPK signaling pathway
daes04210
Apoptosis
daes04218
Cellular senescence
daes04519
Cadherin signaling
daes04620
Toll-like receptor signaling pathway
daes04621
NOD-like receptor signaling pathway
daes04622
RIG-I-like receptor signaling pathway
daes04623
Cytosolic DNA-sensing pathway
daes04625
C-type lectin receptor signaling pathway
daes04920
Adipocytokine signaling pathway
daes05132
Salmonella infection
daes05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130240393 (nfkb1)
09133 Signaling molecules and interaction
04519 Cadherin signaling
130240393 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130240393 (nfkb1)
04218 Cellular senescence
130240393 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130240393 (nfkb1)
04621 NOD-like receptor signaling pathway
130240393 (nfkb1)
04622 RIG-I-like receptor signaling pathway
130240393 (nfkb1)
04623 Cytosolic DNA-sensing pathway
130240393 (nfkb1)
04625 C-type lectin receptor signaling pathway
130240393 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
130240393 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130240393 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
130240393 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
daes03000
]
130240393 (nfkb1)
Transcription factors [BR:
daes03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
130240393 (nfkb1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
130240393
NCBI-ProteinID:
XP_056327849
LinkDB
All DBs
Position
14:complement(55565977..55628191)
Genome browser
AA seq
891 aa
AA seq
DB search
MPCMREENFKLVWSLPAVDGPCLQITEQPKQRGFRFRYGCEGPSHGGLPGASSEKNRKSY
PQVQICNYQGSARVVVQLVTNSQHPHLHAHSLVGKQCDKGICISDMQPKDSSISFPNLGI
LHVTKKNVSKVLEERMMEAYRMGYNYGIFIHPEIDALQGEVRMPRELGEAERNLISTAAS
QQAKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVISEPIYDSKAPNASNLKIVRMDRTAGC
VTGGEEVYLLCDKVQKDDIQVRFYEDDDSGWEAYGDFSPTDVHRQFAIVFKTPKYRDLNL
QKPISVFVQLKRKSDNETSEPKPFTYHPQIIDKEEVQRKRQKTLPNFQDYSGAGGGAGGM
FRGGGGGSTAGGGPSGGGGGGHFFHGYQNFNNFGTGYSCSSGMGGGGTNIKHAHQEPVED
GEDDDEDDDDDPAAGGVVQISDHPGFTRVKTEDLDASGSVLAPHLAELVGRHAEALFHYA
VTGDARLLLAPQRPLMTTQDEDGDTGLHLGVLHSQAEAVRNLAQVISTLPGEDVLNMRND
LYQTPVHLAVLTQQRAALEALLEAGADITLTDRHGDTALHLAAQQKEDDIIHTLLKHRDV
EPLHMVYNTAGLCPLHLAVLSNSLVCVRALLDAGVDVELQELSSGRTALHLATELGNLSL
AGCLLLEGNAYVDSVTYNGSTALHIAAGRGSTKLSALLMAAGADPHKENCEPLFFRDEEE
EEEEDDEGFIPGSSPLSLAVSPEVYNILNGEEYQPSTVVVPPQGDMQSLSSSVKQDLCSA
LDGPAGGWETLADVLGLGILNSAFRLSSCPAGKLLDSYEVSGGTVLELLEGLKRVGNGSA
VTLLQNSVCEEPKSVHNTTHITGAGVCKALQALALGPEESGVCDSGVETSF
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgcatgcgtgaagagaattttaaacttgtttggtctcttccagcagtcgacggg
ccttgcctgcaaatcacagaacaaccaaaacagaggggcttcaggttccgctatgggtgt
gagggcccgtctcacggtgggctcccaggggcctccagtgagaagaaccgcaagtcctac
ccacaagtgcagatctgtaattatcagggctctgcacgtgtggtggttcagctggtgacc
aactctcagcatccgcatcttcacgctcacagtctggtgggaaaacagtgtgataaaggc
atctgcatctccgacatgcagcccaaagactccagcatcagttttcctaatttgggcatc
ctgcacgtgaccaagaagaacgtgagtaaagtgttggaggagcgcatgatggaggcctac
aggatgggttacaattacgggatcttcatccacccggagatcgacgcgctgcagggagaa
gtgcgcatgcccagagaactcggcgaggctgagaggaatctgatcagcactgcagcgtct
cagcaggcgaaggagatggacctcagtgtggttcggctgatgttcactgcgtttctgcca
gacagtgatggaggattctcacgcagactggagcccgtcatctctgagcccatatatgac
agcaaagctccgaacgcctccaatctgaagattgtgcggatggacagaaccgccggctgc
gtgaccggaggagaagaggtttatctgctctgcgacaaagtccagaaagatgacattcag
gtgcgcttttatgaagatgacgattcaggctgggaggcgtatggggatttctctcctaca
gacgtacacagacagtttgccatcgtcttcaagactcctaaatatcgagacctgaacctg
cagaagcccatctcagtgttcgtgcagctgaagaggaaatctgacaatgagacgagcgaa
ccaaagcccttcacctaccatccacagatcatcgataaagaagaagtgcagaggaagaga
cagaagaccctgcctaacttccaggactacagcggagcaggaggcggagccgggggcatg
tttagaggaggagggggcgggtctacagcagggggcggacccagtggtggaggtggcgga
ggacatttcttccacgggtatcaaaattttaataattttgggactggatacagctgctcc
tcgggcatgggaggaggcgggaccaacatcaagcatgcgcaccaagagccagttgaagac
ggtgaagatgatgatgaagatgacgatgatgatccggcagcaggaggtgttgtgcagatc
tctgatcatcctggatttactagagtaaaaacagaagatctggacgcctcaggaagtgtg
ttagcgcctcatttagctgaactagtgggtcgacatgctgaagcgctctttcattacgca
gtaacaggtgatgctcgactgctgctggctccacagcgccccctcatgaccactcaggat
gaggacggagacacgggtctgcatctgggagttctgcacagtcaggcagaggctgtgagg
aatttagctcaggttatttctactcttcctggagaagatgtgctcaacatgaggaacgac
ctctaccagactcctgtgcatttggcggtgctgacgcagcagcgagcggcgctggaggct
ttactggaggccggagcggatataaccctcactgaccgacacggagacacggctctgcat
ctggcagctcagcagaaagaggacgacatcatacacacactgctgaaacacagagacgtg
gagccactgcacatggtctacaacactgcaggtctgtgtcctctccatctggctgtgctc
tccaacagtctggtgtgtgtgcgtgctctgctggatgcgggtgtggatgttgagctccag
gagctctccagcggccgcactgccctccatctggccaccgagctgggcaacctgtcgctg
gccggctgcctgctgctggagggtaatgcatatgtggacagtgtgacctataacggctct
acagctcttcatattgctgccggacgaggctctactaaactgagcgctctcctcatggcc
gcaggagcagatcctcataaggagaactgtgagccgctgttcttcagagatgaggaggag
gaggaggaggaggatgatgaaggatttattcctggatctagtcctctgagcttggccgtc
tctccagaggtgtataatattctgaatggagaagagtatcagccctccactgttgttgtt
ccaccacaaggagacatgcagagcctaagctcctcagtgaagcaggatctgtgctctgct
ctggacgggcccgcgggcggctgggagactctggctgatgttctaggtctcgggatcctc
aacagcgccttcagactgagctcctgtcctgctgggaaactgctggacagctatgaggtg
tctggagggacggtgctggagctgctggagggtctgaagcgggtgggaaacggcagcgct
gtaactttactccagaatagtgtgtgtgaagagcccaagtctgtccacaacacaacacac
atcacaggtgcaggtgtgtgtaaagctctgcaggctctggctctgggtcccgaagaaagc
ggtgtttgtgacagcggcgtggagacgtccttctag
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