Danio aesculapii (panther danio): 130240830
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Entry
130240830 CDS
T11734
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
daes Danio aesculapii (panther danio)
Pathway
daes04120
Ubiquitin mediated proteolysis
daes04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
daes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130240830 (syvn1)
04120 Ubiquitin mediated proteolysis
130240830 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
daes04121
]
130240830 (syvn1)
Enzymes [BR:
daes01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130240830 (syvn1)
Ubiquitin system [BR:
daes04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130240830 (syvn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
FAR1_N
zf-RING_Vps41
zf-HC5HC2H
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
130240830
NCBI-ProteinID:
XP_056328460
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Position
14:complement(28432464..28445637)
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AA seq
616 aa
AA seq
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MVRAALVTATSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLGVMDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPPPAQAPAPPAPANAP
VPPPVNVAPGMMPQFPPGLFPFWGPFPGAPPPAVPGAPAAPTDTPQPSSDGAQGSESGAG
SLSQSSADGASAAPGALPGFPFTMPPPFPSAPWLPMPPPPPFMSSMPPPPSSLSSMSEAE
LRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLSTVATLSPPRSETNTGETSESVN
VESSPSTANTETAGQEIQSGESINGAAGFSQPDSTTEGEKDVKEEDEDDGEPSAAELRRR
RLRKLETTNTPDHDNL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagccgctcttgtaacagccaccagtttggcgctgactggcgcagtggttgcc
catgcctacttcctcaagcaccagttctacccgactgtggtatacctcaccaaaagcagc
cctagtatggcagttttatatattcaggctttcgttttggttttccttctggggaaatta
atgaggaaggtcttttttgggcaactgagagctgctgaaatggagcacctgattgagcgc
tcctggtatgcagtgacagagacctgtttagcctttaccgtcttcagggatgatttttcc
cctcgctttgtggcccttttcaccttgctgcttttcctcaagtgcttccattggctggct
gaagacagggtggactttatggagaggagtccaaatatctcatgggtcttccatttcaga
gtgctctctctaatggtgttgctgggagtgatggactttctgtttgtcaatcatgcgtgt
cacagcattataacaagaggagcgtcagtgcagctggtttttggatttgagtatgcgatt
ctgatgactatggtcctcacaaccttcatcaagtacactttacatacaattgatctgcag
agtgagaatccatgggacaataaggccgtctacatgctctacacagagctctttacaggt
ttcatcaaggtgcttttgtatatggcgttcatgaccatcatgataaaagtgcacaccttc
cctctgtttgctattcgacccatgtatcttgcaatgaggcaattcaagaaggcagtaaca
gacgccatcatgtctcgacgagccattcgtaatatgaatactctctatccagatgccacc
cctgaagacttgcaagccaccgacaatgtgtgcatcatctgcagagaggagatggtgact
ggagccaagaaactgccgtgcaaccacatctttcactcgagttgccttcgctcgtggttc
cagagacagcagacgtgtccgacctgtcgtatggacgtcctgcgagcatctcagccaaac
cagacgcctgcccctcctccagcacaagcacctgccccacctgcccccgccaatgcccct
gtacctccacctgtcaatgttgctccagggatgatgcctcagtttcctcctggtctgttc
cccttttggggtccttttcctggtgcgcctccacctgctgttcctggagcaccggcagct
cctactgacactccacagcccagcagtgatggagcacagggttcagaatcaggagccggc
agtttatcccagtcgagtgcagatggtgcctctgctgctccaggagctttgcctggattc
cccttcaccatgccaccacctttcccatcagctccatggctgccgatgcctcctccacca
ccctttatgtcctcgatgccgccgccaccatccagtctgtccagcatgtctgaggctgag
ctgagagagctggagcaggagggccggcggggtctggaagccagactgcagtgtcttcac
aacatccacactttgctggatgccgccatgctcaacattcaccactacctcagcacagtg
gctactctaagtcctccaagatcagaaacgaacactggcgagacgagtgaatctgtgaac
gtggagtcgtctccgtccaccgccaacacagaaacggccggtcaggagatccagagcgga
gaatctataaatggagcggcaggcttttctcagcccgactcgaccacagaaggagagaaa
gatgtcaaggaggaagatgaggatgatggtgagccgagcgccgccgagttgagacgccgc
cgtctccgcaaactggagaccacaaacactcctgatcacgacaacctttaa
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